Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3349 131 1e-25 seq8311 95.1 1e-14 seq2953 95.1 1e-14 seq4549 91.5 1e-13 >seq3349 Length=644485 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || |||||||| |||||| | || ||| |||||||||||||| | Sbjct 97297 ATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCC 97238 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || || ||||||| || || ||||| || || |||||||| Sbjct 97237 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 97178 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| ||||||||||| || | | | | |||||| ||| Sbjct 97177 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACAAC 97118 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || |||||||| |||| || ||| Sbjct 97117 ATTCAGAAGGAATCTACCCTTCACTTGGTG 97088 Score = 116 bits (128), Expect = 3e-21 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| ||||| ||||||| | || |||||||| | Sbjct 95701 ATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCC 95642 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| |||||| ||||||||||| || || |||||||| Sbjct 95641 GACACCATCGAGAATGTCAAGGCGAAGATTCAAGACAAAGAAGGAATTCCACCCGATCAG 95582 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||||| ||||| | | || || || ||||| ||| ||| || | ||| ||||| | Sbjct 95581 CAGAGGCTGATCTTTGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTC--TGATTACA 95524 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | || || |||||||| || | ||| | ||| Sbjct 95523 ATATCCAGAAAGAATCCACCCTCCATCTGGTG 95492 Score = 116 bits (128), Expect = 3e-21 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| ||||| ||||||| | || |||||||| | Sbjct 95929 ATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCC 95870 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| |||||| || |||||||| || || ||||| || Sbjct 95869 GACACCATCGAGAATGTCAAGGCGAAGATTCAAGATAAAGAAGGAATTCCACCCGACCAG 95810 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||||||||||| | || || || || ||||| ||| ||| || | ||| ||||| | Sbjct 95809 CAGAGACTGATCTTCGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTC--TGATTACA 95752 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | || || |||||||| || | ||| | ||| Sbjct 95751 ATATCCAGAAAGAATCCACCCTCCATCTGGTG 95720 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || || || ||||| | || || | ||||||||||| Sbjct 96157 ATGCAAATCTTCGTAAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTCGAGGCTTCT 96098 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||| ||||| || || || ||||| Sbjct 96097 GACACTATTGAAAATGTCAAAGCGAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 96038 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||| |||| | | ||| || ||||||||||||| | |||| | | || ||||| Sbjct 96037 CAGAGATTGATCTTTGCCGGAAAACAACTCGAAGATGGTCG-CACGTTATCTGACTATAA 95979 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || |||||||| || | ||| | ||| Sbjct 95978 TATCCAGAAAGAATCCACCCTCCATCTGGTG 95948 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | ||||||||| |||||||| | ||||| || || Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || || ||| |||||||||||||| || || ||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168 ||||||||||| | | || || || ||||| || | ||| |||| || || | Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCA--GACTACA 96664 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | ||||| || |||||||| | ||||| || Sbjct 96663 ATATTCAGAAGGAATCTACTCTGCATTTGGT 96633 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| || || || || | || || | || ||||||||| | Sbjct 96385 ATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCC 96326 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||||||| | || ||| |||||| ||||||||||| || || || ||||| Sbjct 96325 GATACCATCGAGAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAATCCCGCCTGATCAG 96266 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAAC-GTCAGCGATTATA 24168 ||||| || || | | || || || ||||| || ||| | | ||| ||| || | Sbjct 96265 CAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTC--CGACTACA 96208 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||| || |||||||| |||| ||||| Sbjct 96207 ACATTCAGAAGGAATCTACCCTTCACTTAGT 96177 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || ||||| ||||| | || || | || || || || | Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || || || |||||||| || || ||||||||||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | || | | || || ||||| ||||| | | | | | |||||| ||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAAC 94838 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||||||||||||||| |||| Sbjct 94837 ATTCAAAAAGAATCTACGCTTCA 94815 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || ||||| || || | || || | || || ||||| | Sbjct 97069 ATGCAGATCTTCGTGAAGACTTTAACGGGGAAGACCATCACGTTGGAGGTTGAGGCTTCC 97010 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| || || ||||| || || || |||||| Sbjct 97009 GACACTATTGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGAATCCCCCCGGATCAA 96950 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCA-GCGATTATAA 24169 |||||| |||| | | || || ||||| ||||||| | |||| | ||| ||||| Sbjct 96949 CAGAGATTGATCTTTGCTGGAAAACAACTTGAAGATGGTCG-CACGTTATCCGACTATAA 96891 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||||||||| || | ||||| || Sbjct 96890 CATCCAAAAAGAATCGACTCTGCATTTGGT 96861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || ||| | || || | ||||| ||||| | Sbjct 96613 ATGCAAATCTTCGTGAAGACTTTGACGGGGAAAACCATCACTTTGGAAGTTGAGGCTTCC 96554 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || || ||||||| || || ||||| || || |||||||| Sbjct 96553 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 96494 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | || |||||||| ||||| | | | | ||||| || Sbjct 96493 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGACGGACGTACTTTGTCTGATTACAAT 96434 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||||||||| |||| || || Sbjct 96433 ATACAGAAAGAATCTACCCTTCACTTGGT 96405 >seq8311 Length=725843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || |||||||| | || || || | || || | || || || || Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || || ||| || ||||||||||| || ||||| ||||| Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | ||||| | || |||||||||||| ||||||| ||||| | || ||||| Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 24170 CATTCAAAAAGAATCTACAATTCAT 24194 ||| || ||||| || ||| ||||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCAT 133678 >seq2953 Length=1164165 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 23977 TTTAGCCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035 ||||| ||||| ||||| | || || ||||| | || || || | |||||| || Sbjct 119857 TTTAGGCAAACCGTCATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTC 119916 Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 || || || || ||| |||||||| | || ||| |||||| |||||||| || Sbjct 119917 GAGGTAGAAGCATCCGATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGG 119976 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || || || ||||||||| ||||||| | || |||||| || | || |||| | | | Sbjct 119977 ATTCCACCAGATCAACAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTA-C 120035 Query 24156 GTCAGC-GATTATAACATTCAAAAAG 24180 | | | ||||||||||||||||||| Sbjct 120036 TTTATCTGATTATAACATTCAAAAAG 120061 >seq4549 Length=1308415 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 ||| || || || |||||||| |||||||| | || || || ||||| ||||||| || Sbjct 663400 AGGAATTCCACCAGATCAACAAAGACTGATCTTCGCTGGAAAACAACTGGAAGATGGGAG 663341 Query 24152 AAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGA 24210 || | | | | || ||||||||||||||||| ||||| | ||||||||||| | ||| Sbjct 663340 AA-CTTTATCTGACTATAACATTCAAAAAGAGTCTACTTTACATTTAGTGTTGCGCTTGC 663282 Query 24211 GAGGAGG 24217 |||| || Sbjct 663281 GAGGTGG 663275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429889402058415