Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq5300 100 2e-16 seq4549 96.9 3e-15 >seq5300 Length=1069934 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || |||||||| || || || ||| ||||| || || Sbjct 717746 ATGCAGATTTTTGTGAAGACTCTCACGGGTAAGACTATAACCCTCGAAGTAGAAGCCTCT 717805 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| | ||| | | || || |||||| ||||| ||||| | || ||||||| Sbjct 717806 GACTCCATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAAGGAATTCCACCTGATCAG 717865 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| ||||||||| ||| ||||||||||| ||||||| || | | || |||||| Sbjct 717866 CAACGACTTATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCTGACTATAAC 717925 Query 115466 ATTCAAAAAG 115475 || ||||||| Sbjct 717926 ATCCAAAAAG 717935 >seq4549 Length=1308415 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| |||||||| || | || || |||||| | ||||||| | ||| | | || Sbjct 663387 GATCAACAAAGACTGATCTTCGCTGGAAAACAACTGGAAGATGGGAGAACTTTATCTGAC 663328 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||||||||||||||| ||||| | |||||| | |||||||| || Sbjct 663327 TATAACATTCAAAAAGAGTCTACTTTACATTTAGTGTTGCGCTTGCGAGGTGG 663275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425297899755160