Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3349 136 4e-27 seq8311 105 6e-18 seq8719 91.5 1e-13 seq2953 91.5 1e-13 >seq3349 Length=644485 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||| || ||||| ||||||||||||||| | Sbjct 97071 CCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGAC 97130 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| || ||||| || ||| |||| | ||||||||| || || ||| Sbjct 97131 AAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGG 97190 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||| | | || ||| | | ||| | || |||| || ||||| Sbjct 97191 ATCCCTTCCTTATC-TTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGAC 97249 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | |||||| || |||| || || ||||||||||||||| Sbjct 97250 TTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATG 97298 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || ||||| || | ||| || ||||| ||||||||||| ||| | Sbjct 96159 CCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGAC 96218 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||| || || || | || | | |||||| || || ||| Sbjct 96219 AGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGG 96278 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| | | || || | | ||| | ||||||| || ||||| Sbjct 96279 ATTCCTTCTTTGTC-TTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGAC 96337 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | |||||| ||||||||||||||| Sbjct 96338 CTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCATG 96386 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | ||| | ||| || || || || || |||||||| Sbjct 95702 GCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGA 95761 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || ||||| ||||| || || ||| |||| | | ||||||||| || || Sbjct 95762 CAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGG 95821 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || || ||| ||||| | ||| | || |||| | ||||| Sbjct 95822 AATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGAC 95881 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || |||||||| ||||| |||||||| |||||| Sbjct 95882 CTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95930 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || || | || | || || || |||||||||||||||||| Sbjct 94790 GCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGA 94849 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| ||||| || || || || ||||||| | ||||| || ||||| Sbjct 94850 CAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 94909 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| ||||||| ||| | | ||| | || |||| | || | Sbjct 94910 GATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAAC 94969 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || |||| ||| || ||||| |||||||| Sbjct 94970 CTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | ||| | ||| || || || || || |||||||| | Sbjct 95475 CCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95534 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||| || || || |||| | | |||||| || || || Sbjct 95535 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGA 95594 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| || ||| ||||| | ||| | || |||| | ||||| Sbjct 95595 ATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACC 95654 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || |||||||| ||||| |||||||| |||||| Sbjct 95655 TCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | ||| || || || || ||||||||||| | Sbjct 95019 CCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95078 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| ||||| || || || || ||||||| | ||||| || |||||| Sbjct 95079 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95138 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||||||| ||| | | ||| | || |||| | || | Sbjct 95139 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95198 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || |||| ||| || ||||| |||||||| Sbjct 95199 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| || || || || ||||||||||| | Sbjct 95247 CCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95306 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| ||||| || || || || ||||||| | ||||| || |||||| Sbjct 95307 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95366 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||||||| ||| | | ||| | || |||| | || | Sbjct 95367 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95426 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || |||| ||| || ||||| |||||||| Sbjct 95427 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || ||||| | ||||| || ||||| ||||| || ||| Sbjct 96843 CCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGAT 96902 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || || || || || |||| || | ||| || ||||| ||| Sbjct 96903 AACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGG 96962 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || || ||| ||||| | || | ||| |||| | ||| | Sbjct 96963 ATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACC 97022 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || |||| ||| || ||||| |||||||| Sbjct 97023 TCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || ||||| | || || ||||| ||||| ||||| || || || || | Sbjct 96627 CGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCG 96686 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||| || || || |||| | | |||||| || || || || ||||||||| Sbjct 96687 TCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTG 96746 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || |||||| ||| | | ||| | || || | | || | || | ||||| Sbjct 96747 TCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATC 96806 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || || || ||||| |||||||||||||| Sbjct 96807 GTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 >seq8311 Length=725843 Score = 105 bits (116), Expect = 6e-18 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| ||||| | || | |||||||| | || |||||||| || |||||||| || Sbjct 133931 AGCCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 133872 Query 131066 TCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGA 131124 | || | || | || || | ||||||||| || |||| ||||| ||||| |||||| Sbjct 133871 ATAGAGTTCTGCCA-TCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGA 133813 Query 131125 GGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTC 131183 || ||||| |||||||| ||| ||| |||| | | ||| | || || | | || Sbjct 133812 GGAATTCCCTCTTTGTCC-TGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTC 133754 Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | ||| ||||| || || |||||||||||||||||||| Sbjct 133753 AACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | |||||| || | ||| | || ||||| || || ||||| || || Sbjct 133701 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAA 133642 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | || ||||| |||||||| ||| |||| | || ||||| || ||||| Sbjct 133641 AGAGTTCTGCCA-TCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGG 133583 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||||| ||| | | ||| | || || | | || | Sbjct 133582 AATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAAC 133523 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || || |||||||||||||||||||| Sbjct 133522 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 >seq8719 Length=610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || || | || | || || || |||||||||||||||||| Sbjct 203 GCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGA 144 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| ||||| || || || || ||||||| | ||||| || ||||| Sbjct 143 CAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 84 Query 131127 GATTCCTTCTTTGTCGGTGATTTTC 131151 ||| || |||||||| ||||||| Sbjct 83 GATACCCTCTTTGTCTTGGATTTTC 59 >seq2953 Length=1164165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 131047 TTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATT 131106 ||||||||||| ||||| | || ||| ||||||| ||| ||||| ||| |||| Sbjct 120059 TTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATC 120000 Query 131107 AAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTC 131165 | ||||| || || || || || || |||||||| ||| | | || || | | || Sbjct 119999 AGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTC-TTGAATCTTAGCTTTCACATTTTC 119941 Query 131166 CACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 | ||||||| | || | |||| ||||| || ||||| || || ||||| ||||| Sbjct 119940 GATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAA 119881 Query 131226 AATCTGCATGAC 131237 |||||||||||| Sbjct 119880 AATCTGCATGAC 119869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471960329877120