Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7502 242 2e-59 seq3349 134 9e-27 seq5145 125 5e-24 seq7323 116 2e-21 seq2953 111 1e-19 seq8311 104 2e-17 >seq7502 Length=58166 Score = 242 bits (268), Expect = 2e-59 Identities = 320/442 (72%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 ||||||| | | ||||| || || || | || || |||||||| || || ||||| Sbjct 27071 ATGGGGAGCGTCAACGTTAACCGGAACATCAGCGATGCTTTCTACCGTTATAAGATGCCT 27130 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 |||||| |||||||| || || || || ||||| || || ||||| || ||||||||| Sbjct 27131 CGCATCCAGGCCAAGGTAGAAGGCAAAGGCAACGGCATCAAGACCGTAATCGTCAACATG 27190 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341 || || || |||||| | || || || ||||| || || || ||||||||||| ||| Sbjct 27191 GTAGACGTGGCGAAGGCGATTGGTCGGCCGGCCACGTATCCTACTAAATATTTCGGCTGC 27250 Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCG 6401 ||| | || ||||||||||| ||||| ||| |||||||| ||||| || ||||| || Sbjct 27251 GAATTGGGTGCTCAGACGCAATTTGACTTCAAGAACGAGCGGTTCATTGTGAACGGCTCT 27310 Query 6402 CATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGT 6461 || | | | || ||||||||| | || ||||| || || |||| | ||| | || Sbjct 27311 CACGATGCCACAAAACTGCAGGACCTGCTCGACGGATTCATCCGCAGATATGTATTATGC 27370 Query 6462 CGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAACACCATCTCT 6521 | || ||| || || ||||||||||| || || || | |||||| | ||| || || Sbjct 27371 CCGGCATGTGACAATCCGGAGACCGAACTGATGGTCAGTTCCAAGAAAGGCACGATTTCA 27430 Query 6522 CAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CACAAACTCAACA 6579 ||||| ||||| || |||||| | |||||| | || | || ||||||||||| | Sbjct 27431 CAGGGTTGCAAGGCCTGCGGTCATCATGGCCTCTTAGA--GAGCAATCACAAACTCAATA 27488 Query 6580 CCTTCATACTGAAGAATCCTCC 6601 | | ||| || ||||| || || Sbjct 27489 CGTACATCCTCAAGAACCCACC 27510 >seq3349 Length=644485 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| | || | ||||| ||||| || || || || ||||||||||||||| Sbjct 96387 CCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGAC 96446 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| |||| |||| || | ||| ||||| ||||| || || || || ||||||| ||| Sbjct 96447 AAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGG 96506 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| || || ||| ||| |||||| |||| || || || | |||||| Sbjct 96507 ATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACT 96566 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || ||||| |||||||| || |||||||| || ||||| Sbjct 96567 TCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Score = 134 bits (148), Expect = 9e-27 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||||||| ||||| ||||| ||||||||||| || |||||| ||| |||| || Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||| || ||||| || || | || ||||| | || | |||||||||||| | Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGA 96752 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 ||||| ||||||||||| | || ||| ||| ||||| || ||||| ||||| Sbjct 96753 ATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTT 96812 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||| |||||| ||||| |||||||| Sbjct 96813 CCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| | || | ||||| ||||| ||| || || || || |||||||||| Sbjct 95017 TACCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAG 95076 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| |||| |||| |||||| || ||||| |||| | ||| ||||||| | Sbjct 95077 ACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAG 95136 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || |||||||| ||||| ||| ||||||| || || || ||||| Sbjct 95137 GGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 95196 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || || || |||||||| |||||||| Sbjct 95197 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| | || | || || ||||| || ||||| ||||| ||||| || | Sbjct 96157 TACCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGG 96216 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | ||||| || |||||||| || | || ||||| | | Sbjct 96217 ACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCG 96276 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||||| ||| || |||||||||| || ||||| || | Sbjct 96277 GGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGA 96336 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || || || || || |||||||| ||||||||||| ||||||||| Sbjct 96337 CCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCATG 96386 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| | || | |||| ||||| ||| || || || || |||||||||| Sbjct 95245 TACCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAG 95304 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| |||| |||| |||||| || ||||| |||| | ||| ||||||| | Sbjct 95305 ACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAG 95364 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || |||||||| ||||| ||| ||||||| || || || ||||| Sbjct 95365 GGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 95424 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || || || |||||||| |||||||| Sbjct 95425 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| | || | ||||| ||| || ||| || || || ||||||||||||| Sbjct 95473 TACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAG 95532 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || | ||||| || ||||| || || | || ||||||| | Sbjct 95533 ACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTG 95592 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| ||| || ||| ||||||| || || || | || | Sbjct 95593 GAATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGA 95652 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || ||||| || || || || | ||||| ||||| || |||||| Sbjct 95653 CCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| | || | ||||| ||| || ||| || || || ||||| || ||||| Sbjct 95931 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGAT 95990 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | ||||||||||||||| || | | || ||||| | |||| Sbjct 95991 AACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 96050 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| ||| || || ||||| | | ||| || | || ||| Sbjct 96051 ATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACT 96110 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || ||||| || || ||||| || ||||| Sbjct 96111 TCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 >seq5145 Length=139114 Score = 125 bits (138), Expect = 5e-24 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18955 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 19014 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 19015 GGTCGTATTTAGCCTTA 19031 Score = 111 bits (122), Expect = 1e-19 Identities = 82/96 (85%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG------GTAATCTCG 25955 ||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| Sbjct 44838 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGGAAGTAGGTAGGGACAGAAAGTAATCTCG 44779 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| |||||||||||||||||||| |||| || Sbjct 44778 TTAATCCATTCATGCGCGTCACTAATTACATGAGGA 44743 Score = 98.7 bits (108), Expect = 7e-16 Identities = 79/96 (82%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 ||| ||||||||||||| |||||||||||||| |||| |||||| ||||||| Sbjct 25382 AAGGCCGTTCCCTTGGCAGTGGTTTCGCTAGAAAGTAAATAGGGACAGAACAGAATCTCG 25441 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| ||||| ||||||| ||||||||||| || Sbjct 25442 TTAATCCATTCATCCGCGTCATTAATTAGATGAAGA 25477 Score = 98.7 bits (108), Expect = 7e-16 Identities = 76/91 (84%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 |||| |||||||||||| ||||||| |||||| |||||||||| | ||||||| Sbjct 46159 AAGCGCGTTCCCTTGGCAGTGGTTTGGCTAGAACGTAGATAGGGACAGAAGAGAATCTCG 46100 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGAT 25986 |||||| ||||||||||||||||||||||| Sbjct 46099 TTAATCTATTCATGCGCGTCACTAATTAGAT 46069 >seq7323 Length=11444 Score = 116 bits (128), Expect = 2e-21 Identities = 83/96 (86%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 ||||||||||||||||| |||||||||||||| ||||||||| | | ||||||| Sbjct 8570 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGAAAGTAGATAGAGACAGAAGAGAATCTCG 8511 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| || ||||||||||||||||||||||||| Sbjct 8510 TTAATCCATTTATGCGCGTCACTAATTAGATGACGA 8475 >seq2953 Length=1164165 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 38130 TTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATT 38189 |||||||| || |||||||| ||| ||| | || ||||| ||||| ||||| || || Sbjct 120059 TTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATC 120000 Query 38190 AGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGG 38249 || || |||||||| | || | || |||||||| ||| || |||||||| | | Sbjct 119999 AGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTTCG 119940 Query 38250 ACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAAT 38309 | ||||| ||| || || | ||||| || |||||||| | |||||||||||| Sbjct 119939 ATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAA 119880 Query 38310 ATCTGCATG 38318 ||||||||| Sbjct 119879 ATCTGCATG 119871 >seq8311 Length=725843 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | |||||| |||| |||||| ||| |||||| || || || || | Sbjct 133477 CATT-CCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGT 133419 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | | | |||| |||||||| |||||||| || || || ||||||||||| | Sbjct 133418 CAGAAAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCG 133359 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || ||||| ||| ||||| || ||||||| | || || || Sbjct 133358 GAGGAATTCCCTCTTTATCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTT 133299 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || | || || || ||||||| | |||| | ||||| |||||||| Sbjct 133298 CAACCTCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| |||||| ||| ||| || || || || || | Sbjct 133705 CATT-CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGT 133647 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | | | | || |||| ||| || ||||| || || |||||||| ||||| | Sbjct 133646 CAGAAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAG 133587 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||||||||| |||||| ||| ||||||| | || || || Sbjct 133586 GAGGAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTT 133527 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || | || || || |||||||| | |||||| ||||| |||||||| Sbjct 133526 CAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334910897271083