Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7244 95.1 2e-14 seq2594 95.1 2e-14 seq6561 91.5 3e-13 seq5447 91.5 3e-13 seq4201 91.5 3e-13 seq5978 89.7 1e-12 seq2172 87.8 4e-12 >seq7244 Length=824547 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 293130 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 293189 Query 142562 GCCCCACATCGGGCAGAAG 142580 ||||||| | |||| |||| Sbjct 293190 GCCCCACGTTGGGC-GAAG 293207 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 292643 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 292702 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 292703 GCCCCACGTTGGGC 292716 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| |||||||||| || ||||||||||||||| Sbjct 372290 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAAGCTCAGGGTCGTGGGTTCGAG 372349 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 372350 CCCCACGTTGGGC 372362 >seq2594 Length=659599 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 593580 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 593521 Query 142562 GCCCCACATCGGGCAGA 142578 ||||||| | |||| || Sbjct 593520 GCCCCACGTTGGGCGGA 593504 >seq6561 Length=433536 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||||| Sbjct 193503 CACGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 193444 Query 142110 ACCCCCGCCAGAGACGCCAG 142129 | |||| |||| || | ||| Sbjct 193443 ATCCCCACCAGGGATGACAG 193424 >seq5447 Length=1753370 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 707557 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 707498 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 707497 CCCCACGTTGGGC 707485 >seq4201 Length=319496 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 136085 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 136026 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 136025 CCCCACGTTGGGC 136013 >seq5978 Length=11724 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4315 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 4256 Query 142564 CCCACAT 142570 ||||||| Sbjct 4255 CCCACAT 4249 >seq2172 Length=619046 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| | Sbjct 94280 GTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATC 94339 Query 142113 CCCGCCAGAGA 142123 ||||| || || Sbjct 94340 CCCGCAAGGGA 94350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027719686669013