Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq4149 102 2e-18 seq1776 77.0 8e-11 >seq4149 Length=718153 Score = 102 bits (112), Expect = 2e-18 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || |||||||||||||| || ||||| || | || | ||| || || ||| | Sbjct 343366 TGCACGTTCCACAAATACGGTCCGTCCGGCTCGGTGCAGAAGTTCGACGGCCTTTGCGTG 343307 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 || ||| ||| | |||||||||||||||||| |||||||||||||||||||| Sbjct 343306 CTGCCGCTCAACATCGTCAACGAGAAGATCTACGTTTTCCTCTGGTTCTGGTTC 343253 >seq1776 Length=339695 Score = 77.0 bits (84), Expect = 8e-11 Identities = 114/162 (70%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || ||||||| ||| |||| ||| | | | || | ||| | |||||| | Sbjct 221544 TGTACCTTCCACAAATTCGGCGCTTCTGGCACTATCCAGAAGTTCGACGCGCTCTGCGTG 221603 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 ||| || ||| | | |||||||||||||| |||||||| |||||||||||| | | Sbjct 221604 CTCGCGCTCAACATTCTGAACGAGAAGATCTATATTTTCCTGTGGTTCTGGTTCATCATA 221663 Query 3487 CTAGCCATCATCAGCGGTATCGTTGTTCTGTACCGCATTGCT 3528 || || |||| |||| | | | || ||| |||| ||| Sbjct 221664 CTGGCGGTCATGTCCGGTGCGGCTCTGCTCTACAGCATGGCT 221705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478786105500