Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3349 131 1e-25 seq2953 105 6e-18 seq8311 95.1 1e-14 seq5300 86.0 5e-12 seq8719 82.4 6e-11 >seq3349 Length=644485 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| |||| | || ||||| | |||||||| || ||||| ||||| || Sbjct 96612 ATACCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCT 96671 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || || || || |||||||| || |||| || | ||| || || || Sbjct 96672 GACAAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGT 96731 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||| || || | | |||| |||||| | | ||| Sbjct 96732 GGAATGCCTTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCC 96791 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | |||||| || ||||| ||||| || ||||||||||| Sbjct 96792 ACTTCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| | || || || | |||||||| || ||||||||||||||| Sbjct 97068 ATACCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCG 97127 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| || || ||||| || || ||| ||||||||||||| || || || Sbjct 97128 GACAAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGT 97187 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || ||||||| || | | || | ||||||| || ||| Sbjct 97188 GGGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCG 97247 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | ||| | ||||| || || | || || || ||||||||||||| Sbjct 97248 ACTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATGG 97299 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| | ||||| || | |||||||| || ||||||||||| ||| Sbjct 96156 ATACCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCG 96215 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || || || || |||||||| || | ||||| | ||| || || || Sbjct 96216 GACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGC 96275 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| |||||| ||| | | || | ||| |||| || ||| Sbjct 96276 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCG 96335 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || || |||| |||||| || |||||||||||| Sbjct 96336 ACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCATG 96386 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || ||||| | | ||| ||||| | || ||||||||||| ||||| || ||| Sbjct 96840 ATACCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCG 96899 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||||||||||||| ||||| |||| | | |||||| ||||| Sbjct 96900 GATAACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGG 96959 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || |||||| || | | ||||| ||||||| | || Sbjct 96960 GGGATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCA 97019 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || | ||| || || || |||||||| Sbjct 97020 ACCTCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| | || | ||| | || |||||||| || || |||||||| Sbjct 95472 ATACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCA 95531 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || || |||||||| || |||| || | ||| || || || Sbjct 95532 GACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGT 95591 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| || | | || | |||||||| | ||| Sbjct 95592 GGAATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCG 95651 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||| || ||||| || ||||| || ||||| |||||| Sbjct 95652 ACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||| || || |||||||| || |||||| ||||||||||| || ||| Sbjct 96417 GTAGATTCTTTCTGTATATTGTAATCAGACAAAGTACGTCCGTCTTCAAGTTGCTTTCCA 96476 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||||||||| || || || || || ||||| || || ||||||| || Sbjct 96477 GCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAATCTTTGCCTTC 96536 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| | || || |||| || | ||||| || |||| ||| Sbjct 96537 ACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTC 96596 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 96597 TTCACGAAGATTTGCAT 96613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 |||||||||||||||||||||||||||| || || || ||||| ||||||||||| Sbjct 94820 CGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACC 94879 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| | | || || || ||||| || || |||||||| || ||| | | Sbjct 94880 CGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGAT-TTTCGCCT 94938 Query 114305 TAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAG 114363 || | | || | |||||||| | ||| || |||| || | || || || || | || Sbjct 94939 TAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAG 94998 Query 114364 TTTTTACAAAAATCTGCAT 114382 | || || || |||||||| Sbjct 94999 TCTTCACGAAGATCTGCAT 95017 >seq2953 Length=1164165 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 ||||||||||||| ||||| | |||||| ||| || | ||||| || ||| ||| Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGA 120002 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | || |||||||| || || ||||| || |||||||| |||||| ||| | | || Sbjct 120001 TCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTT 119942 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | ||| |||| | ||| || || | ||| | || || || || || ||||| || | Sbjct 119941 CGATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGA 119882 Query 114373 AAATCTGCATG 114383 ||||||||||| Sbjct 119881 AAATCTGCATG 119871 >seq8311 Length=725843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || |||| || |||||||| | ||| || || || || |||||||| || Sbjct 133929 CCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAT 133870 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | |||||| | || || ||||| |||| | ||| || || ||||||||| Sbjct 133869 AGAGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGA 133810 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || |||||||| ||| || ||||| | || | ||||| | | ||| || Sbjct 133809 ATTCCCTCTTTGTCCTGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACC 133750 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || |||||||| ||||||||||| Sbjct 133749 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || | || ||| | ||| | || || ||||| || ||||| || || Sbjct 133704 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCA 133645 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | |||||| ||||| || || ||| |||| || || || || || ||| Sbjct 133644 GAAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGA 133585 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| || ||| |||| | || | ||||| | | ||| Sbjct 133584 GGAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCA 133525 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || || |||||||| ||||||||||| Sbjct 133524 ACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 >seq5300 Length=1069934 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 ||||||| ||||| || || | |||||| |||||| | |||||| ||||| | | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | || || || || || || ||||| ||||| || || ||| || || | | || Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTT 717816 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 ||| || ||| | || ||| || || | ||| | || || || || ||||| || |||| Sbjct 717815 CAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAA 717756 Query 114373 AAATCTGCAT 114382 |||||||||| Sbjct 717755 AAATCTGCAT 717746 >seq8719 Length=610 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 |||||||||||||||||||||||||||| || || || ||||| ||||||||||| Sbjct 173 CGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACC 114 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 || |||| | | || || || ||||| || || |||||||| Sbjct 113 CGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTC 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420088864389516