Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7280 87.8 2e-12 >seq7280 Length=1514598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 20235 TAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAG 20294 |||| |||||||||||||| | || ||| |||| | ||||| || |||||||| | Sbjct 1012819 TAAG-CCAGTAACATGAGCGATTATGTAAATTAACAAAGAATATGATGCTATGTTAAACG 1012761 Query 20295 GAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAG 20354 | ||||| || ||||| ||| | ||||||||| ||||| || || || || | Sbjct 1012760 GTACTCCTAAGCCCATATCTGCACTCCTCTGATAAAGCTGCGCAGACAGTTCTCCATTGC 1012701 Query 20355 CTACATAAAATTGACATAACA-AGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCC 20413 ||||||||| ||| |||| | |||||| || || | ||||| | | ||| | Sbjct 1012700 TTACATAAAACTGA-ATAAAATTGTGACATGGTGGCAATGCCATTTTTGGAATGTCAGTT 1012642 Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATC 20445 |||||||| ||| |||| || || | ||| || Sbjct 1012641 GGGTTCCAAGCAGACATTATAATACGTCTGTC 1012610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441323735896120