Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq6924 89.7 4e-13 >seq6924 Length=522618 Score = 89.7 bits (98), Expect = 4e-13 Identities = 98/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 108465 GTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACA-CGACGGCCGACCCACACA 108523 ||||| ||| ||||||||||| ||||| |||||| ||| | |||| || ||||| || | Sbjct 13199 GTGGGCGCTGGATCACAGGGTGCACCATAAGTACAGTGAGACCGAC-GCGGACCCGCATA 13141 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 ||||||| ||||| ||| |||| | |||||||| ||||| | | ||| | |||| Sbjct 13140 ACGCCAAGAGGGGTTTCCTGTTCGCCCACGTGGGGTGGCTGTTCACGACACCTCATCCCG 13081 Query 108584 ACGTGATC 108591 ||||| || Sbjct 13080 ACGTGGTC 13073 Score = 89.7 bits (98), Expect = 4e-13 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 108871 GTGGCGGCGTTGGCTC--TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACG 108928 ||| |||| | ||| | |||||||||| |||||||| || |||||||| ||||| | | Sbjct 67737 GTGTCGGCATCGGCGCCTTCGGCGAGGGCTGGCACAATTATCACCACGTCTTCCCATGGG 67796 Query 108929 ACTACAAGGCCGCCGAGTTGGGGAAC 108954 |||||||||||||||||||||| ||| Sbjct 67797 ACTACAAGGCCGCCGAGTTGGGCAAC 67822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 |||||||| || ||||| ||||||||||||| | | |||||| || || || |||| Sbjct 66791 AGTGGGTGAGGGACCACAGAGTTCACCACAAGTTCACGGACACGGACGCGGATCCGCACA 66850 Query 108524 ACGC-CAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATG 108567 |||| |||| |||| |||| |||||||| |||| ||||||||| Sbjct 66851 ACGCGCAAC-GGGGCTTCTTCTTCTCGCATATGGGTTGGCTCATG 66894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381731422151592