Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3349 118 1e-21 seq8311 98.7 1e-15 seq2953 93.3 4e-14 seq6989 86.0 6e-12 seq5740 84.2 2e-11 >seq3349 Length=644485 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | || | ||||| || | | | || ||||| ||||||||||||||| | Sbjct 96159 CCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGAC 96218 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| |||||||| | | | || || | ||| || || || || Sbjct 96219 AGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGG 96278 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | ||| | | || | ||| |||| | ||| || Sbjct 96279 ATTCCTTCTTTGTC-TTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGAC 96337 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | ||| | || || || |||| |||||| || |||||||||||| Sbjct 96338 CTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCATG 96386 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | || | || ||||| | | || ||||| ||||| |||||||| | Sbjct 96615 CCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGAC 96674 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| |||||||| | | |||| || | ||| || || || || Sbjct 96675 AAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGA 96734 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| |||| | || | | || | |||||| | | ||||| Sbjct 96735 ATGCCTTCTTTGTC-TTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCAC 96793 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||| |||||||| ||||| || ||||||||||| Sbjct 96794 TTCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | || | || || || | | | || ||||| ||||||||||| ||| | Sbjct 97071 CCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGAC 97130 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||||||| || |||| |||| |||||||| || || || || Sbjct 97131 AAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGG 97190 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| | |||| || | | || | ||||||| | ||| || Sbjct 97191 ATCCCTTCCTTATC-TTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGAC 97249 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 |||| || | ||||| || || | || || || ||||||||||||| Sbjct 97250 TTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATGG 97299 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || |||||||||||||| ||| || || || ||| || ||||||||||| | | Sbjct 94824 GATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCA 94883 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||||| | || || || ||||| ||||| |||||||| |||||| || | Sbjct 94884 AAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACA 94943 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| | || ||||| | ||| | || || || || | ||| || Sbjct 94944 TTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTC 95003 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 95004 ACGAAGATCTGCAT 95017 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 |||||||| |||||||| | | |||| || | ||| || || || || || ||||||||| Sbjct 95547 TCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTG 95606 Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| | || | || | | || | |||||||| | ||| ||||| | ||| | Sbjct 95607 TC-TTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAAT 95665 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| || || || || ||||| || ||||| |||||| Sbjct 95666 CGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 >seq8311 Length=725843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| ||| | ||| | | ||||| || || ||||| ||||| Sbjct 133701 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAA 133642 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || ||||| || |||| |||| || || || || || ||||| Sbjct 133641 AGAGTTCTGCCA-TCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGG 133583 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| |||||| |||| | || | ||||| | || || || Sbjct 133582 AATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAAC 133523 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || |||||||| ||||||||||| Sbjct 133522 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||||||| | ||| | | |||||||| || ||||| ||||| Sbjct 133473 CCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAA 133414 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| || |||| |||| ||||| ||||| |||||||| Sbjct 133413 AGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAGGA 133354 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || ||||| || |||||| ||||| | || | ||||| | | || ||| Sbjct 133353 ATTCCCTCTTTATCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACC 133294 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| | || ||| |||| ||||||||||| Sbjct 133293 TCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | || || |||||||| | | |||||||| || ||||||||||| Sbjct 133931 AGCCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 133872 Query 138446 TCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 | ||| | || | || || | || || || | | |||| | ||| || || |||||| Sbjct 133871 ATAGAGTTCTGCCA-TCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGA 133813 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTC 138563 || || || |||||||| ||| |||| | ||||| | || | ||||| | | || Sbjct 133812 GGAATTCCCTCTTTGTCC-TGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTC 133754 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || ||||| || || |||||||| ||||||||||| Sbjct 133753 AACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| ||| | ||| | | |||||||| || || || ||||| Sbjct 133245 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAA 133186 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| || |||| |||| ||||| || || |||||||| Sbjct 133185 AGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAGGA 133126 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| ||||| | || | ||||| | | || ||| Sbjct 133125 ATTCCCTCTTTGTCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACC 133066 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| | || ||| |||| ||||||||||| Sbjct 133065 TCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133019 >seq2953 Length=1164165 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 138427 TTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATT 138486 ||||||||||| || || | ||||||| ||||| | ||||| |||| |||| Sbjct 120059 TTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATC 120000 Query 138487 AGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTC 138545 || |||||||| || || || || || |||||||| ||| | || | ||| | | ||| Sbjct 119999 AGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCT-TGAATCTTAGCTTTCACATTTTC 119941 Query 138546 CACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | ||| |||| | || ||||||| || | || ||||| || || ||||| || || Sbjct 119940 GATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAA 119881 Query 138606 AATCTGCATG 138615 |||||||||| Sbjct 119880 AATCTGCATG 119871 >seq6989 Length=241196 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 153042 AACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCG 153101 ||||| || | |||||| ||||| | || | |||||| ||| | | |||| ||| ||| Sbjct 6472 AACTCTCCGGACAACACACGTCTTACGTAGATATTGCTGGTGTACGCCTCAATGGACTCG 6413 Query 153102 TTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTC 153161 || ||||| | ||||| || || | ||||| ||||| || | ||| | || || Sbjct 6412 TTGTTGCCCAAAATTTGCGCAGTCGACGCGGTTGGCATCGGTGCGATCAAGAGCGAGTTT 6353 Query 153162 CGCAAGCCGTGCG-CTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGG 153220 | || ||||| | ||| | ||||| |||||| | | ||||||||| | ||| ||| Sbjct 6352 CTCACTCCGTGTTTCGCGATTTTCGTC-TTCAACTCATCCCAATCCCATAAATCCGTCGG 6294 Query 153221 TGTCGCGTTCCACATGTCGTACTG 153244 | | |||||||||||||| || Sbjct 6293 CTTAACATTCCACATGTCGTATTG 6270 >seq5740 Length=2170134 Score = 84.2 bits (92), Expect = 2e-11 Identities = 189/275 (69%), Gaps = 12/275 (4%) Strand=Plus/Plus Query 22606 GTACGGATAGTCAAAGTCCTGTTCGACGCCACCCA--TGCGCATGATTTCCTCGTATGCC 22663 ||||||||| || | ||| |||| | ||||||| | | || || || ||| || Sbjct 599503 GTACGGATAATCCGACTCCAGTTCAAGACCACCCAGCTTCTCA--ATCGCCCTGTAAGCG 599560 Query 22664 GTATGTATGAGACCGCCGTCACAGCCCATGTCGACATGGTCGCAATCGACCAGCTGCTGC 22723 ||| ||||| |||| || ||| ||| | || |||||| || ||||||| ||| Sbjct 599561 TTATCGGGCAGACCCCCGTTGCAACCCTCGTCCAGATCGTCGCAGTCCACCAGCTCCTGT 599620 Query 22724 TCCGACAAATCGATA--AGGCGATCGTACTTGATCGCGTACTGACTCTCGAGCGCGCCCA 22781 |||||||| ||| | || | || |||||| ||||| || | |||| || || Sbjct 599621 TCCGACAA--CGACAGCAGTTTGTTGTGCTTGATGGCGTATTGGCCTTCGA-CGTTGCCT 599677 Query 22782 GAC-CGGCAAAAGCCCAACAGGCGCCGCACATGCCCTGATCTTTCACCGACGTGACTTTG 22840 | | | | |||||||||||| | |||||||| ||||||| ||||| | ||||| | Sbjct 599678 GTCACCGAAAAAGCCCAACATGACCCGCACATACCCTGATTCTTCACGGGTGTGACGGCG 599737 Query 22841 -TTGAGGGTGCGCCAATCGAAGCTGGTCGGCCGCT 22874 | || |||||||||||||| ||||| ||| Sbjct 599738 CCTTTCTGT-CGCCAATCGAAGCTATTCGGCAGCT 599771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496207234230960