Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3349 104 2e-17 seq8311 98.7 7e-16 seq5300 87.8 1e-12 seq4549 84.2 2e-11 >seq3349 Length=644485 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||| | | | || || ||||||||||| ||||| ||||| |||||||| Sbjct 96385 TGCCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAG 96444 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | | ||||||| | ||| || ||||| | || | |||||| || ||| || Sbjct 96445 ACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTG 96504 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 | || |||||||| || ||| ||||| || || | || || || ||| | || Sbjct 96505 GGATCCCTTCCTTATCTTGAATCTTTGC-CTTCACGTTCTCGATCGTGTCGGAAGCCTCA 96563 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || |||||||| || |||| ||| || || || ||||||||| Sbjct 96564 ACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCATA 96614 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | || | ||||| ||||||||||| || || || |||||||| ||| Sbjct 96159 CCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGAC 96218 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | |||| || | ||||| || || |||| | | ||| || || || Sbjct 96219 AGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGG 96278 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| ||| || ||| ||| | || || |||||| || || Sbjct 96279 ATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGACC 96338 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||| |||||| || ||||| ||||| Sbjct 96339 TCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||| | | | || | ||| ||||| || ||||| || || || || || Sbjct 95929 TGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCA- 95987 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || || || | ||||| | |||||| || || | ||||| | ||| || || Sbjct 95988 -GATAACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGG 96046 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 || |||||||||||||| ||| || ||| ||| |||| ||||| || | || Sbjct 96047 GGGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTC 96106 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || ||||| || ||||||| ||| ||||| || ||||||||| Sbjct 96107 GACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCATA 96158 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCT 15024 ||| ||||| || || || |||||||| ||||| || ||| || || || | ||| Sbjct 96860 AACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCG--GATAACGTGCGACCATCT 96917 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | |||||| ||||| | ||||| | |||||| || || ||||||||||| || Sbjct 96918 TCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCC 96977 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| || || ||| |||| ||||| ||| | || || || || || ||||| Sbjct 96978 TGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTC 97037 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || | ||| || || || || |||||| Sbjct 97038 TTCCCCGTTAAAGTCTTCACGAAGATCTGCATA 97070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||| | | | || | ||| ||||| || ||||| || || |||||||| Sbjct 95701 TGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAG 95760 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | || || | ||||| || ||| | |||| | ||| |||||| || Sbjct 95761 ACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTG 95820 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||| || || ||| || || ||| | || || || ||| | || | Sbjct 95821 GAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGA 95880 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| || || || || || ||||| || ||||||||||| Sbjct 95881 CCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | || | || || ||||||||||| || || || |||||||||||| Sbjct 97071 CCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGAC 97130 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | |||| || | ||| || || ||| | || | |||||| || ||| ||| Sbjct 97131 AAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGG 97190 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || |||||||| || ||| ||||| || || | || || || ||| || || Sbjct 97191 ATCCCTTCCTTATCTTGAATCTTTGC-CTTCACGTTCTCGATCGTGTCGGAGGCCTCGAC 97249 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| |||||||| || || | || || || ||||| ||||| Sbjct 97250 TTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCAT 97297 >seq8311 Length=725843 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||| | |||||| || || || || || ||||| || || ||| |||| ||||| Sbjct 133458 AAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCGTCT 133399 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 |||||||| || || ||| | |||| ||| ||||| || |||||||| || || || Sbjct 133398 TCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAGGAATTCCCTCTTTATCC 133339 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| ||||||| | ||||| || || ||| || || | || ||||| Sbjct 133338 TGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTC 133279 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| | || ||| |||| ||||| ||||| Sbjct 133278 TTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| || || || || || || || || || ||| |||| ||||||| Sbjct 133228 AACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGTTCTGCCGTCTTC 133169 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||| || || ||| | |||| ||| || || || |||||||| || ||||| Sbjct 133168 TAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAGGAATTCCCTCTTTGTCCTG 133109 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||||||| | ||||| || || ||| || || | || ||||| || Sbjct 133108 GATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCTT 133049 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| | || ||| |||| ||||| ||||| Sbjct 133048 ACCCGCGAGGGTTCTTACGAAAATCTGCAT 133019 >seq5300 Length=1069934 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 14987 CTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15046 ||||||| ||||| || || ||| | | | ||||| |||||||||||||| | | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106 | | || || || || ||||||||||||||| || |||||| || ||| ||| Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTT 717816 Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166 | || | || |||||| || | ||| || || ||||| || ||||| || |||| Sbjct 717815 CAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAA 717756 Query 15167 AAATTTGCATA 15177 |||| |||||| Sbjct 717755 AAATCTGCATA 717745 >seq4549 Length=1308415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||||||| | || |||||||| | ||||| |||||||| ||||| || || Sbjct 663275 CCACCTCGCAAGCGCAACACTAAATGTAAAGTAGACTCTTTTTGAATGTTATAGTCAGAT 663334 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | ||||| | ||||| | |||||| |||||| | |||| | ||||| || |||| Sbjct 663335 AAAGTTCTCCCATCTTCCAGTTGTTTTCCAGCGAAGATCAGTCTTTGTTGATCTGGTGGA 663394 Query 15070 ATTCCT 15075 |||||| Sbjct 663395 ATTCCT 663400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357353264626505