Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3349 118 1e-21 seq8719 100 3e-16 seq2953 91.5 1e-13 seq8311 87.8 2e-12 seq4549 84.2 2e-11 seq5740 82.4 7e-11 >seq3349 Length=644485 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||| ||| | || || ||||| || ||||||||||| | Sbjct 95475 CCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95534 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| || || |||||| | |||||||||||| || Sbjct 95535 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGA 95594 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || ||||| || ||| ||||| | |||| |||||| | | |||||| Sbjct 95595 ATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACC 95654 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||| || ||||| || ||||| || ||||| |||||| Sbjct 95655 TCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||| | |||||||| | ||||| || || ||||||||||| || | Sbjct 96615 CCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGAC 96674 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || |||||||| || || |||||| || ||||||||| || || Sbjct 96675 AAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGA 96734 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCG-TACTCTCGAC 127065 ||||| || ||||| |||||| ||| | | || | |||||| | | || || || Sbjct 96735 ATGCCTTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCT-TCCAC 96793 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | |||||| || ||||| ||||| || ||||||||||| Sbjct 96794 TTCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| ||| | || || ||||| || ||||||||||| | Sbjct 95703 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95762 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| || ||| |||||| || |||||| ||||| || Sbjct 95763 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGA 95822 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || || || ||| ||||| | |||| |||||| | | |||||| Sbjct 95823 ATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACC 95882 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||| || ||||| || ||||| || ||||| |||||| Sbjct 95883 TCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95930 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||||| || | |||||||| | || || |||||||| || || || ||| Sbjct 96843 CCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGAT 96902 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || || ||||||||||| ||||||||| ||| ||||| || || Sbjct 96903 AACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGG 96962 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| || ||| ||||| | ||| | ||||| | | ||| || Sbjct 96963 ATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACC 97022 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || | ||| || || || |||||||| Sbjct 97023 TCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | |||||| || | ||||| || || ||||| ||||||||| | Sbjct 97071 CCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGAC 97130 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || || || ||||| ||| |||| | |||||||||||||| || Sbjct 97131 AAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGG 97190 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| | | ||| | | || ||| | | |||| ||||| | |||||| Sbjct 97191 ATCCCTTCCTTAT-CTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGAC 97249 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 ||||| ||| | ||||| || || | || || || ||||||||||||| Sbjct 97250 TTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATGG 97299 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 |||||| ||||||||||| ||||||||| || ||||| || ||||| ||||| || Sbjct 94820 CGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACC 94879 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || |||| |||| |||||||||||||| || ||||| ||||| ||||||| ||| Sbjct 94880 CGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTT 94939 Query 127036 GAGTTGTTCGACGGTGTCCG-TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | | |||| |||||| | | || || || || | || | || || || || | || Sbjct 94940 AACATTCTCGATGGTGTCGGATGCT-TCAACCTCCAACGTGATGGTCTTTCCTGTTAAAG 94998 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 94999 TCTTCACGAAGATCTGCAT 95017 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||| || | || || ||||| || || |||||||| | Sbjct 95019 CCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95078 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || ||||| ||||| || || |||| |||| |||||||||||||| Sbjct 95079 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95138 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCG-TACTCTCGAC 127065 || ||||| ||||| ||||||| ||| | | |||| |||||| | | || || || Sbjct 95139 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCT-TCAAC 95197 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || | ||| || || || |||||||| Sbjct 95198 CTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | |||| || | || || ||||| || || |||||||| | Sbjct 95247 CCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95306 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || ||||| ||||| || || |||| |||| |||||||||||||| Sbjct 95307 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95366 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCG-TACTCTCGAC 127065 || ||||| ||||| ||||||| ||| | | |||| |||||| | | || || || Sbjct 95367 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCT-TCAAC 95425 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || | ||| || || || |||||||| Sbjct 95426 CTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| ||||| || ||||||||||| | Sbjct 96387 CCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGAC 96446 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || || || |||||||| |||| | |||||||||||||| || Sbjct 96447 AAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGG 96506 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| | | ||| | | || ||| | | |||| ||||| | | ||| || Sbjct 96507 ATCCCTTCCTTAT-CTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAAC 96565 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || |||| ||| || || || || ||||| Sbjct 96566 TTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 >seq8719 Length=610 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 |||||| ||||||||||| ||||||||| || ||||| || ||||| ||||| || Sbjct 173 CGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACC 114 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || |||| |||| |||||||||||||| || ||||| ||||| ||||||| ||| Sbjct 113 CGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTT 54 Query 127036 GAGTTGTTCGACGGTGTC 127053 | | |||| |||||| Sbjct 53 AACATTCTCGATGGTGTC 36 >seq2953 Length=1164165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||||||||| || ||||| | || || ||| |||| |||||| || ||| ||| Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGA 120002 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGT 127042 ||| |||||| ||||| || || || ||||| ||||| ||| | | |||| | | | Sbjct 120001 TCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCT-TGAATCTTAGCTTTCACATTT 119943 Query 127043 TCGACGGTGTCCG-TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| || | | || || || |||| ||| | || || || || || ||||| || Sbjct 119942 TCGATGGTATCGGATGCT-TCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCAC 119884 Query 127102 AAAAATCTGCATG 127114 |||||||||||| Sbjct 119883 GAAAATCTGCATG 119871 >seq8311 Length=725843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||| || || ||||| | ||| ||||| || || || ||||| || Sbjct 133929 CCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAT 133870 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | ||| || ||||| ||||||| || |||||||| ||||| Sbjct 133869 AGAGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGA 133810 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCG-TACTCTCGA 127064 || ||||| |||||| ||| ||| |||| | | || | ||||| | | || || | Sbjct 133809 ATTCCCTCTTTGTCC-TGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCT-TCAA 133752 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || || || || || |||||||| ||||||||||| Sbjct 133751 CCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 >seq4549 Length=1308415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942 ||| ||||| || || |||||||| ||||||| ||||||||||||||||| || || || Sbjct 663271 TGCACCACCTCGCAAGCGCAACACTAAATGTAAAGTAGACTCTTTTTGAATGTTATAGTC 663330 Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 | || | ||| || || |||||||||||| |||||| || || ||||| || Sbjct 663331 AGATAAAGTTCTCCCATCTTCCAGTTGTTTTCCAGCGAAGATCAGTCTTTGTTGATCTGG 663390 Query 127003 AGGTATGCC 127011 || || || Sbjct 663391 TGGAATTCC 663399 >seq5740 Length=2170134 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 21206 AGACCGCCGTCGCAGCCCATGTCTACAGAGTCGCAGTCTACCAATTGCTGTTCCGCTAAA 21265 ||||| |||| ||| ||| ||| | | ||||||||| |||| | |||||||| || Sbjct 599570 AGACCCCCGTTGCAACCCTCGTCCAGATCGTCGCAGTCCACCAGCTCCTGTTCCGACAAC 599629 Query 21266 TCTATCAATCTATCGTATTTGATGGCGTACTGACTCTCTAGCGCGCCTAGACCCGCAAAC 21325 | || | | | || ||||||||||| || | || | |||| ||| ||| Sbjct 599630 GACAGCAGTTTGTTGTGCTTGATGGCGTATTGGCCTTCGACGTTGCCTGTCACCGAAAAA 599689 Query 21326 GCCCAACACGCCCCGCACATGCCCTGATCTTTCACCGACGTGACTTTG---TTCAGCGTT 21382 |||||||| | ||||||||| ||||||| ||||| | ||||| | ||| | | Sbjct 599690 GCCCAACATGACCCGCACATACCCTGATTCTTCACGGGTGTGACGGCGCCTTTCTG---T 599746 Query 21383 CGCCAATCGAAGCTGGTCGG 21402 |||||||||||||| |||| Sbjct 599747 CGCCAATCGAAGCTATTCGG 599766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475447942142320