Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3349 136 4e-27 seq8311 118 1e-21 seq6989 109 5e-19 seq5300 96.9 3e-15 >seq3349 Length=644485 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| | ||| ||||| || || ||||| || |||||||| ||||| Sbjct 95700 ATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCA 95759 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | ||||| || ||| | |||| || |||||||| || Sbjct 95760 GACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGT 95819 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||| || |||| || | ||||||||||| |||| Sbjct 95820 GGAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCG 95879 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| ||| || |||||||| ||||| || ||||||||||| Sbjct 95880 ACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| || || ||||| || |||||||| ||||| | ||| ||| || Sbjct 95492 CACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTC 95551 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||||| || || | |||| | ||||| || || ||||| |||||||| ||||| Sbjct 95552 GAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTGTCTTG 95611 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || |||| || | ||||||||||| |||||| || | |||| ||| || Sbjct 95612 AATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTT 95671 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| ||||| || ||||||||||| Sbjct 95672 TCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || || || || |||| | ||| ||||| || || ||||| || ||||||||||| || Sbjct 95928 ATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCA 95987 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 | | || || | ||| || | ||||||||| || | ||||||| ||||| ||||| Sbjct 95988 GATAAC-GTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGG 96046 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 || || ||||| || || ||||| || ||||| ||| | ||||| |||| ||| Sbjct 96047 GGGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTC 96106 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | || | || || || || | ||| ||||| || |||||||| Sbjct 96107 GACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA--TCGTCCAAT 45194 |||||| || |||||||| || ||||| || || |||| || | || || | Sbjct 96638 ATGCAGAGTAGATTCCTTCTGAATATTGTAGTC--TGACAAAGTTCGTCCGTCCTCGAGC 96695 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 ||||| || || | |||| || ||||| || || |||||||||||||| ||||||||| Sbjct 96696 TGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGAATT 96755 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || || | || | |||||| || | || ||||| | |||| |||||| || Sbjct 96756 TTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTTCCA 96815 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| || ||||| ||||| Sbjct 96816 GTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||| || || || |||||| | || || || | ||| Sbjct 97095 TGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCGAGTTGC 97154 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | || | || ||||| || || || || ||||| ||||||||||| ||| Sbjct 97155 TTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAATCTTT 97214 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||| | |||||||||||| || | ||||| || || Sbjct 97215 GCCTTCA-CGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTTCCCGT 97273 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| ||||| Sbjct 97274 TAATGTCTTCACGAAAATCTGCAT 97297 >seq8311 Length=725843 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | || || ||||| || || || ||||| ||||||||||| || Sbjct 133020 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCA 132961 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || |||| ||| || || || | |||| |||||||| || || Sbjct 132960 GAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGA 132901 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || |||||||| ||||| || || | ||||| ||||| |||| ||| Sbjct 132900 GGAATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCG 132841 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || ||||| || ||||| || ||||| |||||||| Sbjct 132840 ACCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCAT 132791 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | || || ||||| || || || ||||| ||||||||||| || Sbjct 133248 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCA 133189 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || ||||| ||||| ||| | |||| |||||||| ||||| Sbjct 133188 GAAAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGA 133129 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || ||||| || || ||||| ||| | |||| ||||| || | || Sbjct 133128 GGAATTCCCTCTTTGTCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCA 133069 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || | || ||| |||| ||||| ||||| Sbjct 133068 ACCTCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133019 >seq6989 Length=241196 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 124101 ATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTA 124160 ||| |||| |||||||||||||||| || ||||| |||| ||||| ||| | || Sbjct 6264 ATTCTGCAATACGACATGTGGAATGTTAAGCCGACGGATTTATGGGATTGGGATGAGTTG 6323 Query 124161 AAACAACGCATAT--CGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGA 124218 || ||| | || ||| ||||| || | |||||||| ||| | || ||||| | Sbjct 6324 AA--GACGAAAATCGCGAAACACGGAGTGAGAAACTCGCTCTTGATCGCACCGATGCCAA 6381 Query 124219 CGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATT 124278 | || | ||||| |||||||| || |||||||| ||| | ||| ||| ||| | |||| Sbjct 6382 CCGCGTCGACTGCGCAAATTTTGGGCAACAACGAGTCCATTGAGGCGTACACCAGCAATA 6441 Query 124279 TGTACGTGCGACGAGTGTTAGCCGGCGATTT 124309 | ||||| |||| ||||| |||| || || Sbjct 6442 TCTACGTAAGACGTGTGTTGTCCGGAGAGTT 6472 >seq5300 Length=1069934 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||||||||| || || | || | ||||||||| || || ||||| ||||| || Sbjct 717901 ATCTTCCAATTGTTTGCCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTT 717842 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||||||| || | ||| | || ||| || | || |||||||| || | Sbjct 717841 ATCTTGAATTTTAGCCTTCACATTTTCAATGGAGTCAGAGGCTTCTACTTCGAGGGTTAT 717782 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| || |||||||| ||||| Sbjct 717781 AGTCTTACCCGTGAGAGTCTTCACAAAAATCTGCAT 717746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451952954194280