Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8311 109 6e-19 seq3349 93.3 5e-14 >seq8311 Length=725843 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||| |||||||| | ||| |||||| |||||||| ||||| || Sbjct 133017 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAA 132958 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | |||| || || ||||||||||| || |||| || ||||| || | || Sbjct 132957 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAGGA 132898 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| || ||| ||||| ||| | | | | ||||| | ||| || Sbjct 132897 ATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACC 132838 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | |||||||| ||||| || || || || |||||||||||||| || Sbjct 132837 TCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATGTT 132788 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||| |||||||| | ||| ||| || ||||| || ||||| || Sbjct 133701 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAA 133642 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || || |||||||||||||| |||| ||| ||||| || | || Sbjct 133641 AGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGGA 133582 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || ||||| || || ||| | || | | ||||| || ||| || Sbjct 133581 ATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAACC 133522 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || | |||||||| || ||||| || ||||| || || || |||||| Sbjct 133521 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133474 >seq3349 Length=644485 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | || | ||||||||| | || || || ||||||||||| || | Sbjct 95701 TGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAG 95760 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || || || | || |||||||| || || ||||| |||| | ||||||||||| | Sbjct 95761 ACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTG 95820 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || || || |||||| ||||| || | | |||||| | || | Sbjct 95821 GAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGA 95880 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||| || || || || || |||||||| || || |||||||| Sbjct 95881 CCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | || | ||||||||| | || || || |||||||| ||||| | Sbjct 95929 TGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAG 95988 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||| ||||| | || ||||| || || ||||| || ||||| | |||||| || | | Sbjct 95989 ATAACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGG 96048 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| |||| | | | ||||| | || | Sbjct 96049 GGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGA 96108 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||||||||| || || |||| || || || ||||||||||| Sbjct 96109 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| ||| ||||| || ||||||||||| || | ||| || |||| ||| Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || || || || |||| | |||||| || | || | || || ||||| Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGA 96752 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || ||| ||| | || | | ||||| | |||||| |||| || || ||||| Sbjct 96753 ATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTT 96812 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| ||||| || || || ||||| Sbjct 96813 CCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||||||||| |||||||| |||| |||||||| || || || ||| Sbjct 96195 TCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAAT 96254 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | | |||||| || | ||| | | || ||||| ||||| || | || Sbjct 96255 ATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTC 96314 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| | || || |||| ||||||||| || ||||||| ||||| || Sbjct 96315 TCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACG 96374 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 96375 AAAATCTGCAT 96385 Score = 86.0 bits (94), Expect = 7e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || || || ||||||||||| || || || || || | || || Sbjct 95492 CACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTC 95551 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||| || || || || |||| | |||||| |||| || | | || ||||| Sbjct 95552 GAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTGTCTTG 95611 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | |||||| | || || |||| ||| || || || Sbjct 95612 AATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTT 95671 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||||||| || || |||||||| Sbjct 95672 TCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || |||||||| || || | ||| || |||| || || ||||| || || || Sbjct 96423 TCTTTCTGTATATTGTAATCAGACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAG 96482 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| |||| || | | ||||| || ||||| ||| | || Sbjct 96483 ATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTC 96542 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| | || || |||| ||||||||||| ||||||| || || || Sbjct 96543 TCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACG 96602 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 96603 AAGATTTGCAT 96613 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||| ||||| | ||| || |||| ||||| ||||| |||||||| Sbjct 97107 TCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAG 97166 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| |||| || | | ||||| || ||||| ||| | || Sbjct 97167 ATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTC 97226 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| | || || || | ||||||||||| ||||| | || || || Sbjct 97227 TCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACG 97286 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 97287 AAAATCTGCAT 97297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565175566686360