Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3349 104 2e-17 seq8311 95.1 8e-15 >seq3349 Length=644485 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| || | || ||||||||||||| ||| ||| || || ||||| || || | | Sbjct 96615 CCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGAC 96674 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| | || || | ||||| || |||| || | | ||||||||| | || Sbjct 96675 AAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGA 96734 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||||||| ||||| || | || | | ||||||| |||||| Sbjct 96735 ATGCCTTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACT 96794 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 96795 TCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548 || ||| |||| | ||| ||||| | || | || ||||||||| || || ||||| Sbjct 94787 ATTGCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATC 94846 Query 39549 GGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || ||| |||| | || || | |||||| || |||| ||||| | |||||||| | Sbjct 94847 GGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGG 94906 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 || | || |||||||| ||||| |||| || | | ||||| | ||| Sbjct 94907 AGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTC 94966 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||| || || || || || |||||||| || |||||||||||||| Sbjct 94967 AACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||| | || |||||||| || | || |||||| |||||||| ||||| | Sbjct 96386 GCCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGA 96445 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 |||| ||| | || || | ||| || || |||| || | |||||||||||| | || Sbjct 96446 CAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGG 96505 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||||| || || || ||| || | || | | ||||| | || || Sbjct 96506 GATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAAC 96565 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || ||||| ||||| ||||| || |||||||| ||||| Sbjct 96566 TTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | || ||||||| || | ||| |||||| || || || ||||| | | Sbjct 95247 CCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95306 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | |||| | || || | |||||| || |||| ||||| | |||||||| | || Sbjct 95307 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95366 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || |||||||| ||||| |||| || | | ||||| | ||| || Sbjct 95367 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95426 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || || || || |||||||| || |||||||||||||| Sbjct 95427 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | || || |||| || | ||| |||||| || || || ||||| | | Sbjct 95019 CCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95078 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | |||| | || || | |||||| || |||| ||||| | |||||||| | || Sbjct 95079 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95138 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || |||||||| ||||| |||| || | | ||||| | ||| || Sbjct 95139 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95198 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || || || || |||||||| || |||||||||||||| Sbjct 95199 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 >seq8311 Length=725843 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| |||| ||| | ||| ||||| || || ||||| || | Sbjct 133701 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAG-- 133644 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || | |||| ||| || | ||| || ||| | || || | || |||||||| | Sbjct 133643 --AAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGG 133586 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTG-CGCTTT 39667 || | ||||||||||| ||||||| || | || ||| |||||| | ||||| Sbjct 133585 AGGAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTT- 133527 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || | ||| || || |||||||| | ||||||||||| |||||||| Sbjct 133526 CAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 39563 CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTT 39622 |||| ||||| || || || |||| || ||||| |||||||||| || | || |||| Sbjct 133859 CATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGAATTCCCTCTT 133800 Query 39623 TGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682 |||| ||||| ||| | || ||| |||||| | ||| || || | ||| | Sbjct 133799 TGTCCTGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGA 133740 Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || |||||||| | ||||||||||| |||||||| Sbjct 133739 TGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347331950888669