Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3349 125 7e-24 seq8311 109 5e-19 seq8630 105 7e-18 seq2953 96.9 3e-15 seq8719 87.8 2e-12 >seq3349 Length=644485 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | ||||| || |||||||| | || ||||||||| || Sbjct 96385 ATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCC 96326 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 || | | | | | | |||| || || | |||||||| ||||| |||||| || || Sbjct 96325 GATACCATCGAGAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAAT-CCCGCCTGATCA 96267 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||||| |||||||| || |||| ||||| || ||||||||| Sbjct 96266 GCAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAA 96207 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || |||||| | || || || || || || || Sbjct 96206 CATTCAGAAGGAATCTACCCTTCACTTAGTACTTCG 96171 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| |||||||||||| |||| ||||||||| || Sbjct 97297 ATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCC 97238 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| || | || || || || || || |||| || Sbjct 97237 GACACGATCGAGAACG-TGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCA 97179 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || || || || |||| || || | ||| ||||| Sbjct 97178 GCAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACAA 97119 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || |||||| | || || || |||||||| || Sbjct 97118 CATTCAGAAGGAATCTACCCTTCACTTGGTGCTTCG 97083 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || || || || Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | ||||||| ||||||||||| || || |||| || Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | || | ||||| ||||| || || |||| |||||| | ||| |||||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAAC 94838 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| ||| | ||||| || | || || ||| | ||||| ||| Sbjct 94837 ATTCAAAAAGAATCTACGCTTCACCTTGTACTTCGTCTCAGAGGTGGC 94790 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || |||||||| | || || ||||| || Sbjct 97069 ATGCAGATCTTCGTGAAGACTTTAACGGGGAAGACCATCACGTTGGAGGTTGAGGCTTCC 97010 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | || || | || || || ||||| ||| | || ||| Sbjct 97009 GACACTATTGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGAATCCCCCCGGATCAA 96950 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | || || ||||| || || || | ||||| | |||||| ||| Sbjct 96949 CAGAGATTGATCTTTGCTGGAAAACAACTTGAAGATGGTCGCACGTTATCCGACTATAAC 96890 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| |||| ||||||||||| || ||| Sbjct 96889 ATCCAAAAAGAATCGACTCTGCATTTGGTTCTTCGT 96854 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || || || || Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | ||||||| ||||||||||| || || |||| || Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95126 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | || | ||||| ||||| || || |||| |||||||| || |||||| Sbjct 95125 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95066 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| || ||| | || || || ||||||| || Sbjct 95065 ATCCAGAAAGAATCCACCCTTCACCTGGTGCTTCG 95031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || ||||| || ||| | || || || || | Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||| | |||||||| || ||||| | || || Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | ||||| |||||||| || |||| || || | |||||||| Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAGACTACAAT 96662 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || |||||| | || ||||||||||| || || Sbjct 96661 ATTCAGAAGGAATCTACTCTGCATTTGGTACTCCG 96627 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || || || || Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | ||||||| ||||||||||| || || |||| || Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95354 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | || | ||||| ||||| || || |||| |||||||| || |||||| Sbjct 95353 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95294 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| || ||| | || || || |||| || || Sbjct 95293 ATCCAGAAAGAATCCACCCTTCACCTGGTACTTCG 95259 >seq8311 Length=725843 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||||||||| |||||||| || |||||||| | || || || || | Sbjct 133702 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133761 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| ||||| | ||||||||||||||||| | || || Sbjct 133762 TGACACAATAGAGAATGTAAAAGCCAAAATTCAGGACAAAGAGGGAATTCCTCCGGATCA 133821 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | || ||||| ||| |||| || | | || || |||||||| Sbjct 133822 GCAACGTTTGATCTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACTCTATCGGACTACAA 133881 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||| ||||| | ||||||||||| || Sbjct 133882 CATCCAGAAGGAGTCCACGCTGCATTTAGT 133911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| || || || || ||||| ||||| |||||||| | || ||||| || Sbjct 132787 AAACATGCAAATCTTTGTGAAGACTCTCACAGGCAAGACCATCACTCTTGAGGTCGAAGC 132846 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | ||| | || | || || | || |||||||||||||| | || Sbjct 132847 TTCTGACACAATAGAAAATGTAAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGA 132906 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || || || || || | || ||||| || ||||| |||| | || || ||||| Sbjct 132907 TCAGCAACGTCTGATCTTTGCCGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGACTA 132966 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| ||||| | || || ||| |||| |||||| | |||| || Sbjct 132967 TAATATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGG 133017 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||||| ||| ||| |||| || |||||||| | || || || || | Sbjct 133018 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133077 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| ||||||| ||||||||||||||||| | || || Sbjct 133078 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 133137 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| || || || | || |||| | || || ||||| || Sbjct 133138 GCAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133197 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| |||| |||||| | |||| || Sbjct 133198 TATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGG 133245 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||||| ||| ||| |||| || |||||||| | || || || || | Sbjct 133246 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133305 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| ||||||| || |||||||||||||| | || || Sbjct 133306 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCA 133365 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| || || || | || |||| | || || ||||| || Sbjct 133366 ACAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133425 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || ||| |||| ||||| | |||| || Sbjct 133426 CATCCAGAAGGAGTCCACACTTCATCTGGTTTTGCGTCTTCGAGGAGG 133473 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||||||||| |||||||| || |||||||| | || || || || | Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | || | |||||| | |||||||| || ||||| | || || Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| ||||| || || || || | | || || ||||| || Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||| |||| |||||| | |||| || Sbjct 133654 CATCCAGAAAGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGG 133701 >seq8630 Length=35068 Score = 105 bits (116), Expect = 7e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| |||||||| ||||||||||| || || | |||||| || || ||||| || Sbjct 13743 GTAGGTTTCGATGAGCAATGAATACATTTCGGAATGAATGTTCTCTATTGCAATTTGGAA 13684 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||| || || || |||||||| | || |||||||| ||| | || | ||||| Sbjct 13683 GCCATAGAAACAACGCGCCTCTGAAATCTTAACTTCTTGGCAGAATCTTTCAATAAGATT 13624 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAAT 133342 ||| |||||||| ||||| ||||| || || |||| |||||| ||||||| Sbjct 13623 TTCATTGACGATACCGTCAGAAGCGGCAAAGAACGCCAACACGTGGGATATGAAAT 13568 >seq2953 Length=1164165 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| |||||||| || || || ||| |||| || || || || Sbjct 119872 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTCGAGGTAGAAGCATCC 119931 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| || || | ||||||||||| ||||| | || ||| Sbjct 119932 GATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGGATTCCACCAGATCAA 119991 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||||||| | || || | ||| || | || || ||| Sbjct 119992 CAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTACTTTATCTGATTATAAC 120051 Query 38424 ATCCAAAA 38431 || ||||| Sbjct 120052 ATTCAAAA 120059 >seq8719 Length=610 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAA 38330 || || |||||||| | || || || || |||||| | | | | |||| | ||| Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390 |||| ||||||||||| || || |||| || || | | || | ||||| ||||| Sbjct 63 ATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAA 122 Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 || || |||| |||||| | ||| |||||||| ||||| ||| | ||||| || | Sbjct 123 CTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCACCTT 182 Query 38451 GTGCTGCGTTTGAGAGGCGGC 38471 || || ||| | ||||| ||| Sbjct 183 GTACTTCGTCTCAGAGGTGGC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500117199541120