Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8311 138 4e-27 seq1415 129 2e-24 seq3349 123 1e-22 seq5300 122 3e-22 seq3031 87.8 7e-12 >seq8311 Length=725843 Score = 138 bits (152), Expect = 4e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || || ||||| || || |||||||| |||||| |||| Sbjct 133702 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133761 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| |||||||| || || || ||||||||||| ||||| Sbjct 133762 TGACACAATAGAGAATGTAAAAGCCAAAATTCAGGACAAAGAGGGAATTCCTCCGGATCA 133821 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| || || | || || || | |||||||| |||||| | |||| || || Sbjct 133822 GCAACGTTTGATCTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACTCTATCGGACTACAA 133881 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || || || ||||| ||| |||| Sbjct 133882 CATCCAGAAGGAGTCCACGCTGCATTTAGTCTTACGACT 133920 Score = 134 bits (148), Expect = 5e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || || ||||| || || |||||||| |||||| | || Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | || |||||| ||||| || ||||| |||||||||||||| Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| | || ||| | || || ||||| |||||||| |||||| | | || ||||| Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | || || | |||||||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCA 133677 Score = 131 bits (144), Expect = 7e-25 Identities = 173/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| | ||| || | ||||| || || |||||||| |||||| |||| Sbjct 133246 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133305 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct 133306 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCA 133365 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || ||| | || || ||| | ||||| || |||||| | | || ||||| Sbjct 133366 ACAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133425 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACATTTTTT 391288 || | ||||| | |||||||| | || || | || ||||| ||| || |||| Sbjct 133426 CATCCAGAAGGAGTCCACACTTCATCTGGTTTTGCGTCTTCGAGGAGGAATGCAGATTTT 133485 Score = 125 bits (138), Expect = 3e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| | ||| || | ||||| || || |||||||| |||||| |||| Sbjct 133018 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133077 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| ||||| || || || || ||||||||||| ||||| Sbjct 133078 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 133137 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || ||| | || || ||| | ||||| || |||||| | | || ||||| Sbjct 133138 GCAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133197 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | |||||||| Sbjct 133198 TATCCAGAAGGAGTCCACACTTCA 133221 Score = 109 bits (120), Expect = 2e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || || || |||||||| || ||| | ||| Sbjct 132791 ATGCAAATCTTTGTGAAGACTCTCACAGGCAAGACCATCACTCTTGAGGTCGAAGCTTCT 132850 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || ||||| ||||| || ||||||||||| ||||| Sbjct 132851 GACACAATAGAAAATGTAAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGATCAG 132910 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || ||||| ||||| || |||||| | | || |||||| Sbjct 132911 CAACGTCTGATCTTTGCCGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGACTATAAT 132970 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | |||||||| Sbjct 132971 ATCCAGAAGGAGTCCACACTTCA 132993 >seq1415 Length=940728 Score = 129 bits (142), Expect = 2e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||| ||||| || | | || | | || |||| | |||| || |||||| Sbjct 10048 AAAATGAAGGAAACTGCTGCATCTTACTTAAGCACTTCAGTAAAGAATGCTGTCATTACT 9989 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || ||||| |||||| ||||||| ||||| || |||||||| || || || ||| Sbjct 9988 GTACCAGCATATTTTAATGATTCACAACGACAAGCTACAAAAGATGCTGGTCAGATAGCT 9929 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || || ||||| ||||| | ||||||||||| || |||||||| || |||||||| Sbjct 9928 GGATTGAATGTACTTCGTGTAATTAATGAACCAACTGCAGCTGCGCTTGCATATGG 9873 >seq3349 Length=644485 Score = 123 bits (136), Expect = 1e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||||||| ||||| ||||| | || || ||| |||| Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || ||||||||||| || ||||| ||||| |||||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || ||||| || || || ||| |||||||| | || || ||| Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAGACTACAAT 96662 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || || || || ||| | |||| Sbjct 96661 ATTCAGAAGGAATCTACTCTGCATTTGGTACTCCGACT 96624 Score = 104 bits (114), Expect = 9e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || ||||| || ||| | || ||||| | || Sbjct 96613 ATGCAAATCTTCGTGAAGACTTTGACGGGGAAAACCATCACTTTGGAAGTTGAGGCTTCC 96554 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||| ||||||||||||||||| || || || ||||| Sbjct 96553 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 96494 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||||||||||| ||| | |||||| | ||||| ||| Sbjct 96493 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGACGGACGTACTTTGTCTGATTACAAT 96434 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | || || | || |||||||| ||| Sbjct 96433 ATACAGAAAGAATCTACCCTTCACTTGGTA 96404 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||| | || || ||||| || || || || || || | || Sbjct 97297 ATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCC 97238 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||| ||||||||||||||||| || || || ||||| Sbjct 97237 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 97178 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || ||||| || || ||| | |||||| | ||||| || Sbjct 97177 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACAAC 97118 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || |||||||| || Sbjct 97117 ATTCAGAAGGAATCTACCCTTCACTTGGT 97089 Score = 98.7 bits (108), Expect = 4e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| || || || || || | || || || | || Sbjct 96385 ATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCC 96326 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | ||| || |||||||| || |||||||| || |||||||| Sbjct 96325 GATACCATCGAGAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAATCCCGCCTGATCAG 96266 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || ||||| || || || ||| | ||| || | || || || Sbjct 96265 CAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAAC 96206 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||||||| | |||| |||| Sbjct 96205 ATTCAGAAGGAATCTACCCTTCACTTAGTACTTCGACTTCGAGG 96162 >seq5300 Length=1069934 Score = 122 bits (134), Expect = 3e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | ||||| || || || || || ||||| ||||| || || || || ||| | Sbjct 717743 ATTATGCAGATTTTTGTGAAGACTCTCACGGGTAAGACTATAACCCTCGAAGTAGAAGCC 717802 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| ||||||| | | || |||||||||||||||||||||||||| |||||| Sbjct 717803 TCTGACTCCATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAAGGAATTCCACCTGAT 717862 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || ||||| | ||||| | || |||||| | ||||||||| | ||| | | || ||| Sbjct 717863 CAGCAACGACTTATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCTGACTAT 717922 Query 391227 AATAT 391231 || || Sbjct 717923 AACAT 717927 >seq3031 Length=1346382 Score = 87.8 bits (96), Expect = 7e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 56606 CTCATGAAGAATTGATATACACACCCTTCCATCCTGGTAAATATTAGGATGTGTTATTTT 56665 |||||| | ||||||||||| || ||||| || |||||| ||||| ||| | Sbjct 389354 CTCATGTAATATTGATATACAAACATCTCCATTTCTGTCAATATTTGGATGCCATATCTC 389295 Query 56666 ACTAGTAAATTTAAATGTTGGTGCTTTATTTGGATATTCATAAGGAAATAAGATTTTTCC 56725 | | ||||||| | | |||||| || ||||||||| | ||||| | | | | Sbjct 389294 AGTTATAAATTTCATTTTTGGTGGCCTAAGTGGATATTCTTTTGGAAACTGTAAATGTGC 389235 Query 56726 TTTAAAAATACCACCTTCATAAGGAGTATTAGGGGGTCCTATTATAATTACATCCCATAC 56785 |||||||| |||||| ||||| |||| || ||||| || |||| || |||||| Sbjct 389234 TTTAAAAAAACCACCCTCATATAAGGTATCCGGAGGTCCAATAATAAGCACTTCCCATCG 389175 Query 56786 ATATATAT 56793 |||||||| Sbjct 389174 ATATATAT 389167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975493283558444