Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq8891 239 3e-57 seq2684 154 1e-31 seq1415 118 8e-21 seq8256 116 3e-20 >seq8891 Length=324241 Score = 239 bits (264), Expect = 3e-57 Identities = 741/1126 (66%), Gaps = 27/1126 (2%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||||||||| || | ||| || || ||||| || || || || ||||| | || ||| Sbjct 193699 ATACCATTGGCGTCAATATCGAAAGTAACTTCGATCTGCGGCACGCCTCTAGGCGCGGGT 193758 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | |||| | || ||| | |||||||||||||| | || || Sbjct 193759 GGAATTCCCGTAAGCTCAAATTTGCCAAGAATGTTATTATCTTTAGTCATCGCTCTCTCT 193818 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| ||| ||| ||| ||| | | ||||| || || || || ||||| | | Sbjct 193819 CCTTCGTAAACTTGAATAAGTACTCCCGGCTGATTGTCCGAGTACGTGGTAAA--CGTTT 193876 Query 517454 GATTTT--TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 || ||| || ||| ||||| |||||||| | || | ||||||| | ||| || | Sbjct 193877 GAGTTTGCTTCGTAGGTATTGTAGTGTTTCTCTTGATCAATGTGGTCATGACACCGCCAG 193936 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 | || || | ||| || || | ||||| ||||| | || | | || || | | | Sbjct 193937 CGGTCTCAATACCCAGTGACAATGGAGTCACATCCAACAGAAGCAGATCCTGTACCTCCT 193996 Query 517572 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 || | | ||| || || || ||||| | || || || || || || || |||| Sbjct 193997 CAGACTTGTCACCGTGCAGGATGGCCGCTTGGACCGCTGCGCCGTAAGCGACGGCCTCAT 194056 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTT 517690 | || |||| || || || | | || |||||||| || | || | || || | | Sbjct 194057 CCGGGTTAATAGATTTGTTCAACTCCTTGCCATTGAAGAAGTCCTGTAGCAACTTTTGT- 194115 Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750 | ||| || || | | || || || |||| || || || || || | |||||| Sbjct 194116 ATCTTTGGTATCCTGGTGGAGCCACCGACTAGAACTATGCTGTGGACTTGAGCCTTATCC 194175 Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC-TAAACAAGTCTGA 517809 | || | ||| ||| | || || |||||||| ||| |||| | |||| || | Sbjct 194176 ATCTTCGCGTCCCTTAATGCCTTCTCTACGGGTTCGAGAGT-GCTCCTGAACAGATCAGC 194234 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 517867 || || || ||||| | || || || | || || | || || ||||| || || ||| Sbjct 194235 GCAGAGCTCCTCGAACCTGGCCCTGGTGATAG--ACGTATAGAAGTCAATACCCTCAAAC 194292 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 | || |||| ||||| | | ||| ||||| || || | | || || | ||| Sbjct 194293 AGCGAGTCAATCTCAATACTCGCTTGTGTCGATGAGCTCAGCGTTCTCTTTGCTCTTTCG 194352 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCT--TTTGCTGATTGATTCAAATCTGTTTTATATT 517985 || || ||||| || | || || ||| |||| || | | ||| |||| |||| || | Sbjct 194353 CAAGCCGTCCTCAGACGTCTTACTGCTCTTTTGTTGGT--ACTCAGATCTTTTTTGTACT 194410 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCC 518043 | |||||||| || | ||| | ||| | || | ||||| || ||||||||||| || Sbjct 194411 TCCTCTTGAACTCCTGAACGAA--ATGGTTGACCATTCGATTGTCGAAATCTTCACCACC 194468 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 | | ||||| || | || | | | |||| ||||| || || |||| | ||||| Sbjct 194469 AAGATGAGTATCGCCGGCTGTGGATTTCACTTCGAAAATGCCGTCCTCAATCGTCAAAAT 194528 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 | || || || || ||||| | ||| || || || |||||| |||| | | Sbjct 194529 GGACACGTCGAAAGTACCGCCACCAAGATCGAAGATGAGGACATTC--TTCTCGCCCGAG 194586 Query 518164 GTTTT--TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221 ||||| | || ||||| ||||| | ||||| || || || || || || ||||| | | Sbjct 194587 GTTTTCTTGTCGAGACCGTACGCTATCGCAGCCGCTGTAGGCTCGTTTATTATTCTGAGA 194646 Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 518281 || || |||||||| || || || || || || |||||||| || || || ||||| Sbjct 194647 ACGTTCAGACCAGCGATAGCGCCGGCGTCCTTCGTCGCTTGTCTCTGAGAGTCATTAAAG 194706 Query 518282 TATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGT 518340 || || || || ||||||||||||| || || || | |||| ||| || ||||| Sbjct 194707 TAAGCTGGTACGGTAATAACGGCATTCGTGACAGTCATGCCCAA-ATATGCCTCCGCCGT 194765 Query 518341 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 || ||||| || ||| | ||| || || | || || |||||| Sbjct 194766 TTCCTTCATCTTTGTTAGTACCATAGAGGACACTTCCTC-GGGGAA 194810 Score = 107 bits (118), Expect = 1e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 518520 CATCNAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 || | || ||||||||| | ||||| || ||| | |||| || || ||||| ||||||| Sbjct 196106 CACCGAAGATAGTATTGCTGGGATTCATAGCAACCTGATTCTTTGCCGCATCACCAATCA 196165 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 | || || || || |||| |||||| ||| || || ||||| ||||||||||||| Sbjct 196166 GCCTCTCGGTGTCGGTGAATGCAACATAACTTGGTGTGGTCCGATTGCCTTGATCATTCG 196225 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 | || || ||||| || |||| || | |||||||| ||| Sbjct 196226 CGATGATCTCAACCTTGCCATGCTGGAAAACACCTACGCAA 196266 >seq2684 Length=1306576 Score = 154 bits (170), Expect = 1e-31 Identities = 600/926 (65%), Gaps = 18/926 (2%) Strand=Plus/Minus Query 517607 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 517666 || || || ||||| ||||| ||||| ||||| | | | || || | || || || Sbjct 948810 GCCGCGCCGTATGCCACAGCCTCATCCGGATTGATGGACTTGTTGAGCTCCTTGCCGTTA 948751 Query 517667 AAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGAT-CCTCCAACTAATA 517724 || |||| | || |||| ||| | ||| || ||||| | || | || || || | | Sbjct 948750 AAGAAATCTTGCAGGAGTT-TCTGGATCTTCGGGATACGCG-TGCTGCCACCGACCAGGA 948693 Query 517725 CAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 517784 | || ||||| | ||| || || |||| || | ||| | ||| || || |||| Sbjct 948692 CGATGTCATGGATCTGCGACTTGTCCATCTTCGCATCGCGCAGCGATTTCTCCACAGGTT 948633 Query 517785 CAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 | ||| | | || | ||| | |||||||| || || || || || || || Sbjct 948632 CGAGAGTACCACGGAAGAGGTCCGCGCAAAGTTCCTCAAAACGCGCCCTGGT--GATGGA 948575 Query 517845 CAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 | || || |||||||||||| | | ||||| | || || | | || || || || Sbjct 948574 AGTGTAGAAGTCAATTCCTTCGTAAAGCGAATCGATCTCGATGCTCGCCTGCGTAGAGGA 948515 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCT 517960 || | | || || || ||||| ||||| || | || | || | || || |||| | Sbjct 948514 CGACAAGGTGCGCTTGGCGCGTTCGCATGCAGTACGTAAGCGACGAAGAGCGCGTTTGTT 948455 Query 517961 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAG 518019 | | | ||| || |||| || || | |||||| || | || | | || | || | Sbjct 948454 GCTGG--TCAGGTCCTTTTTGTACTTGCGCTTGAATTCCTGCACGAAATGAT-TGACCAT 948398 Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| || || || || || || ||||| | ||| | |||| ||| | | | || | ||| Sbjct 948397 ACGGTTGTCGAAGTCCTCGCCACCCAAGTGAGTGTCACCTGCCGTGGATTTGACCTCGAA 948338 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | |||||||| | | || | || ||||||| || |||||||| | ||| || || Sbjct 948337 GATACCATCTTCGATCGTCAGGATAGATACATCAAAAGTACCACCACCGAGATCGAAGAT 948278 Query 518140 AAGTACATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 || || ||| || | ||| || ||||||||||||||||| | || || || Sbjct 948277 CAGGACGTTCCGCTCGCCGG--TGGCCTTCTTATCAAGACCATACGCTATCGCGGCGGCG 948220 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || || || || ||||| | ||| ||||| | || | || | || || || || || Sbjct 948219 GTGGGCTCGTTGATAATACGCAATACATTCAAGCCTGAGATGGTGCCAGCGTCCTTGGTT 948160 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 || || | ||| || ||||| || || || || || || || ||||||| ||| || Sbjct 948159 GCCTGACGTTGCGAGTCGTTGAAGTAAGCGGGCACGGTGATCACGGCATTAGTGACAGTC 948100 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 || || | || || ||| || | |||||||| || | ||| || | || | Sbjct 948099 TTGCCTAGGTACGCCTCTGCGGTCTCCTTCATTTTTACCAAGACCATCGAACTCACTTCT 948040 Query 518378 TCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 || ||| | | ||| | || || ||| ||||| || | |||||| |||| Sbjct 948039 TCAGGGAAGAAAGTCTTTGTCTCTCCTTTGTATTGTACTTGAATCTTTGGTTTGCCACCA 947980 Query 518438 ACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAA 518497 |||| | ||| |||||||||||| ||||||||| | |||||| || |||| | ||| Sbjct 947979 TCATTGACAACAGTAAATGGCCAGTGTTTCATATCAGCCTGAACAGTTGGGTCTTCAAAG 947920 Query 518498 TCTCTACCAATTAATCGTTTTGCATC 518523 | |||||| || | || ||||| Sbjct 947919 CGACGACCAATCAACCTCTTGGCATC 947894 >seq1415 Length=940728 Score = 118 bits (130), Expect = 8e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| | |||||| | ||||| |||| ||||| ||||||||||||||||| | Sbjct 9851 TTTATCTTCCTGTTTATCCATGCCATATGCAAGCGCAGCTGCAGTTGGTTCATTAATTAC 9910 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | | ||||| | ||||| || || |||||||| || ||||||| ||||||||| Sbjct 9911 ACGAAGTACATTCAATCCAGCTATCTGACCAGCATCTTTTGTAGCTTGTCGTTGTGAATC 9970 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 ||||||||||| || |||||||| || |||| ||||| Sbjct 9971 ATTAAAATATGCTGGTACAGTAATGACAGCATTCTTTACT 10010 Score = 107 bits (118), Expect = 1e-17 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || |||||||| || |||||||||||||||||||||| ||| |||| || || || Sbjct 9873 CCATATGCAAGCGCAGCTGCAGTTGGTTCATTAATTACACGAAGTACATTCAATCCAGCT 9932 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | | ||| ||| || ||||||| |||| |||||||||||||||||||||||| Sbjct 9933 ATCTGACCAGCATCTTTTGTAGCTTGTCGTTGTGAATCATTAAAATATGCTGGTACAGTA 9992 Query 322364 ATAACTGCTTTATT 322377 || || || || || Sbjct 9993 ATGACAGCATTCTT 10006 >seq8256 Length=771335 Score = 116 bits (128), Expect = 3e-20 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 870798 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 870857 |||| || |||| |||| ||| || ||||| ||||| |||||| | ||||| ||||||| Sbjct 600006 TTATAGTAGATTTTTCTAGTCCCAACATTGCCAAAGAGATGCATGTGGGACACTTAAGAT 599947 Query 870858 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 870917 | ||||| ||||| || ||||| ||| | |||||| | ||||| ||||| Sbjct 599946 CTACTATAATTGGAGACAGTATTTCTAGACTGTTAGAATACTTAGGACATGATGTGCTGA 599887 Query 870918 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 870966 | || |||||| | ||||||||||| || || || ||||||||||| || Sbjct 599886 GGATCAATCATATAGGTGATTGGGGTACACAGTTTGGTATGTTAATAGC 599838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780381100046458