Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq987 86.0 7e-12 >seq987 Length=458604 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 || ||| | || || || ||||| | ||||| || ||||| || |||||||| |||||| Sbjct 19637 GCTTACCGGTTGGCCCTTCAGACGCGTGAGCAACACATCAGAAGGGACAAAGCCACCAGT 19696 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 || || ||||| || || || || ||||||||||||||| | ||||| | || ||| Sbjct 19697 AATATTTGCACTGCACAAGCTTTGTTGGCTAATATGTCTGCGATGTATGCGGTGTACCAT 19756 Query 154014 GG 154015 || Sbjct 19757 GG 19758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579148413257120