Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq5300 123 2e-23 seq8311 113 3e-20 seq3349 107 1e-18 seq2953 91.5 1e-13 >seq5300 Length=1069934 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||| || ||||||||||| ||||| | ||| |||| |||| ||||| || ||||| | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | ||||||||||| || | || | || ||||| || ||| || || || | Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTT 717816 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || || ||| ||| || || |||| |||||| || || ||||||||||||||||||| Sbjct 717815 CAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAA 717756 Query 34972 AGATCTGCATA 34982 | ||||||||| Sbjct 717755 AAATCTGCATA 717745 >seq8311 Length=725843 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | || ||||| |||| |||| || ||||| || |||||||| | Sbjct 133019 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAG 132960 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| | || ||||| || || |||||||| || || |||||||| ||| | | Sbjct 132959 AAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAG 132900 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||| || || |||||| || || | |||| | ||| || || | Sbjct 132899 GAATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGA 132840 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || | || ||||| || || |||||||||||||||||||| ||||| || Sbjct 132839 CCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATGTT 132788 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | || ||||| |||| |||| |||||||| ||||||||||| | Sbjct 133703 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAG 133644 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| |||| || || || || ||||| || || || |||||||| || | | Sbjct 133643 AAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAG 133584 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| || || || || |||| | ||| || |||| Sbjct 133583 GAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAA 133524 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || |||||||| || || || || |||||||| Sbjct 133523 CCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 >seq3349 Length=644485 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||||||||| || || || | | ||| | || || Sbjct 97089 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCG 97148 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || || || ||||| || | || | ||| ||||| || | Sbjct 97149 AGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGA 97208 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || |||||| || |||| ||| ||||||||| Sbjct 97209 ATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTT 97268 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | |||||||| || |||||||| Sbjct 97269 CCCGTTAATGTCTTCACGAAAATCTGCAT 97297 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| || |||||||| || | | || |||| || || |||||||||||||| Sbjct 95966 TTCTTTCTGGATATTATAGTCAGATAACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAA 96025 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||| || | || | || |||||||| ||||||| |||||| Sbjct 96026 GATCAATCTCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATT 96085 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| ||||| || || | || ||||| ||||| || | |||||| || Sbjct 96086 TTCAATAGTGTCAGAAGCCTCGACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTAC 96145 Query 34970 AAAGATCTGCATA 34982 ||||| |||||| Sbjct 96146 GAAGATTTGCATA 96158 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| ||||||||| ||||| || || || ||| | ||| | || || Sbjct 95037 ACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCT 95096 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| |||| || |||||| || | || | ||||| ||||| Sbjct 95097 AGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGG 95156 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || ||| || || || || || | || || ||||| || | || ||||| | Sbjct 95157 ATTTTCGCCTTAAC--ATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCT 95214 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || | ||||||||| |||||||||||| Sbjct 95215 TTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95246 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| ||||||||| ||||| || || || ||| | ||| | || || Sbjct 95265 ACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCT 95324 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| |||| || |||||| || | || | ||||| ||||| Sbjct 95325 AGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGG 95384 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || ||| || || || || || | || || ||||| || | || ||||| | Sbjct 95385 ATTTTCGCCTTAAC--ATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCT 95442 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || | ||||||||| |||||||||||| Sbjct 95443 TTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95474 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| || ||| ||||||||||| ||||| || || | ||| | || || Sbjct 96177 ACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCG 96236 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || | ||||| || |||| | || || ||||| | Sbjct 96237 AGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGA 96296 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||| || || || || | || |||||| || || | || ||||| | Sbjct 96297 ATCTTAGCTTTCAC--ATTCTCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCT 96354 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| | ||| ||||| || |||||||| Sbjct 96355 TCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | || |||||| || ||||||||||| || | | || |||| || Sbjct 96860 AACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGATAACGTGCGACCATCTTC 96919 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||||| ||||| || | || || || || | || | || ||||| || Sbjct 96920 AAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCTG 96979 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||||| ||||| | | || | || |||||||| || | || ||||| || Sbjct 96980 AATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTCTT 97039 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| | ||||||||| |||||||||||| Sbjct 97040 CCCCGTTAAAGTCTTCACGAAGATCTGCATA 97070 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| |||||||| || || || | | | ||| | || || || ||||| || ||||| Sbjct 94826 TTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAA 94885 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 |||| || |||||| || | || | ||||| ||||| || ||| || || | Sbjct 94886 GATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAAC--A 94943 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || || ||||| || | || ||||| ||||| || | ||||||| Sbjct 94944 TTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTC 95003 Query 34968 ACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 95004 ACGAAGATCTGCATA 95018 >seq2953 Length=1164165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||| ||||||||||| || || | | || |||| || | |||||| ||||| || | Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGA 120002 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | ||||| || || ||| | || | |||||| ||||| |||||| ||| || | Sbjct 120001 TCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTT 119942 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | || || || || |||| ||| || || || |||||||| || ||||| | Sbjct 119941 CGATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGA 119882 Query 34972 AGATCTGCAT 34981 | |||||||| Sbjct 119881 AAATCTGCAT 119872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324598415094504