Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq7280 104 3e-17 >seq7280 Length=1514598 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104862 TTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTG 104921 || |||| || |||||| | || ||||| | |||||||||||| ||| || | | Sbjct 1012200 TTGAAGAGTTGTTATGGTTCATCAAAGGATCAACAAATTCTAAAGAATTAGCAGATAAAG 1012259 Query 104922 GTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACT 104981 || | | | ||| || | |||||||| ||| ||||| ||||| ||||| ||| | Sbjct 1012260 GTATACACATCTGGGATAAAAATGGTTCGCGTGCTTTTTTGGATTCCTGTGGCTTTAGCG 1012319 Query 104982 TTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTC 105041 || | ||||||||||||||||| | |||||||| |||||||||||| || || Sbjct 1012320 ACAGAGAGGAAGGTGATTTAGGACCTGTCTATGGATTCCAATGGAGACATTACGGTGCAG 1012379 Query 105042 AATATATCGACTGTG-ATACCGACTATACCGGCCAAGGT 105079 |||| | || | || |||| || ||| | || |||||| Sbjct 1012380 AATACAAAGA-TATGCATACAGATTATGCAGGACAAGGT 1012417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658330010254280