Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8048 107 4e-18 >seq8048 Length=87867 Score = 107 bits (118), Expect = 4e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 ||| |||||||| || || ||||| |||| | |||||| || || |||||||| ||||| Sbjct 19350 CTTCAGCACCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGCTTGCGCCGCCGGCA 19291 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| |||| |||||||| | | ||| | ||| |||||| ||||||| Sbjct 19290 CTTGGAGGCGGCCACGCGGTTCCTCTGGCGCTTCCTCTCCAGCTTGATTTTCTCCTGGTT 19231 Query 241609 CTCCATGTCGATCGGAGAC 241627 ||||||||||||||| ||| Sbjct 19230 CTCCATGTCGATCGGCGAC 19212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931429248485120