Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3349 158 2e-33 seq8311 129 1e-24 seq4549 93.3 8e-14 >seq3349 Length=644485 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||| | ||||| |||||||| | || | ||||| ||||| Sbjct 95921 AATTTGCATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATT 95980 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| |||||||| | | ||| || | ||||||||||||||| || |||||||| || Sbjct 95981 ATAGTCAGATAACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTG 96040 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || |||||||| || || || || || | ||| | |||| |||||| || || Sbjct 96041 ATCCGGGGGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGA 96100 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||| ||||| | || || || || ||||| | || ||||| || |||||||| Sbjct 96101 AGCCTCGACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| |||| ||||| || | ||||| || ||||||||| Sbjct 96840 ATACCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCG 96899 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||||||| | | ||| || | ||||||||| ||||| || |||||||||||||| || Sbjct 96900 GATAACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGG 96959 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || || || | || | |||| |||||| ||||||| |||| Sbjct 96960 GGGATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCA 97019 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || || |||| || || || || || ||||| Sbjct 97020 ACCTCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| | |||||| |||||||| | || | ||||| ||||| || || Sbjct 95472 ATACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCA 95531 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | ||||| || ||||| || | ||||| ||||| || Sbjct 95532 GACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGT 95591 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| ||||| || || | || | ||| || || ||||||| ||| Sbjct 95592 GGAATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCG 95651 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || || ||||||||||| || || |||||||| Sbjct 95652 ACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 107 bits (118), Expect = 3e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||| | ||||| |||||||| | || | ||||| ||||| Sbjct 95693 AATTTGCATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATT 95752 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | ||| || | ||||| || || || || | |||||| || Sbjct 95753 GTAATCAGACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTG 95812 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || ||||||||||||||||| || || | || | ||| || || ||||| Sbjct 95813 GTCGGGTGGAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGA 95872 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||| || || | || || || || || ||||||||||| || || |||||||| Sbjct 95873 AGCCTCGACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| | |||||||||||| || | || | ||||| || || || || Sbjct 95244 ATACCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 95303 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | || |||| |||||| || ||||| |||||||| || ||||| ||| Sbjct 95304 GACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGA 95363 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| ||||| | || | ||| || || ||||| | ||| Sbjct 95364 GGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCA 95423 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || ||||||| || || || || || ||||| Sbjct 95424 ACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 102 bits (112), Expect = 1e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| | ||||||||| | || | |||| || || ||| || Sbjct 96150 ATTTGCATACCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTG 96209 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | || | || || | ||||| || ||||| || | ||||| ||| Sbjct 96210 TAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGA 96269 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || ||||||||||| ||||| || || | ||| | ||| || |||||||| Sbjct 96270 TCAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAG 96329 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || | || || || || || || | ||||| || || || ||||| Sbjct 96330 GCCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 >seq8311 Length=725843 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | ||| | |||||| || |||||||| || | ||||| | Sbjct 133689 CGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCA 133630 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||| ||| || ||||| || || | | || ||||||||||| || |||||||| Sbjct 133629 TCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGGAATACCTTCTTTG 133570 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||||||||| | |||| ||| || || || || | ||||| || ||||| || Sbjct 133569 TCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAACCTCAAGAGTGATG 133510 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||| || || |||||||| || || |||||| Sbjct 133509 GTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133474 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | ||| | ||| || ||||||||||| || | ||||| Sbjct 133005 CGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGTTCTGCCG 132946 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || |||||||| || | | || ||||| ||||| ||||| |||||| Sbjct 132945 TCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAGGAATTCCCTCTTTA 132886 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | |||| |||| || || || |||| || || || ||||| || Sbjct 132885 TCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACCTCAAGAGTGATG 132826 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || ||||| |||||||| || Sbjct 132825 GTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATGTT 132788 Score = 114 bits (126), Expect = 2e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | ||| | ||| || ||||||||||| || | ||||| Sbjct 133233 CGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGTTCTGCCG 133174 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||||||| |||||||| || || | | || ||||| ||||| ||||| ||||| Sbjct 133173 TCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAGGAATTCCCTCTTTG 133114 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || ||||| | ||||| ||| || || || || | ||||| || ||||| || Sbjct 133113 TCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATG 133054 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||| | || ||| |||| || || |||||| Sbjct 133053 GTCTTACCCGCGAGGGTTCTTACGAAAATCTGCATT 133018 >seq4549 Length=1308415 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 |||||||||||||||||||| | |||| |||| ||||||||| || | ||||||||| Sbjct 663749 CCTTCTTTATCTTGTATTTTTGCCTTTACATTTTCAATAGTATCTGATGCCTCAACTTCG 663808 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || ||||| || || |||||||| Sbjct 663809 AGGGTGATGGTCTTCCCCGTAAGAGTTTTCACGAAAATTTGCAT 663852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899554392167760