Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3349 116 5e-21 seq8311 91.5 2e-13 >seq3349 Length=644485 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| ||||||||||||| ||||| || ||||| |||| || Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| ||||| ||||||||||| || || || || Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||| | ||| ||||| |||||||| || ||||||| ||||| || ||| Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAGACTACAAT 96662 Query 156003 AT 156004 || Sbjct 96661 AT 96660 >seq8311 Length=725843 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | ||||| | || || || || || || | || || |||| || Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || || || || ||||||||||| |||||||| || ||||| || || Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | |||| | ||||| ||||| || |||||| ||||||| | || || ||||| Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || |||||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCAT 133678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731790643278800