Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3349 136 8e-27 seq5300 132 9e-26 seq8311 123 5e-23 seq2953 122 2e-22 seq4549 113 9e-20 seq8719 102 2e-16 >seq3349 Length=644485 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||| || | ||| ||||| | ||||| || || ||||| || || Sbjct 96612 ATACCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCT 96671 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||||| | || || | |||||||| |||||||| | |||||| ||||||||| Sbjct 96672 GACAAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGT 96731 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| || ||||| || | ||||| | ||| Sbjct 96732 GGAATGCCTTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCC 96791 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||||| ||||| ||||| | ||||| | || |||||||| Sbjct 96792 ACTTCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || ||||| | ||| | ||||| ||| ||||| || Sbjct 96840 ATACCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCG 96899 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| || | |||||| ||||||||||| |||||||||||||| || Sbjct 96900 GATAACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGG 96959 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| ||||| || || || || ||||| |||| || || | || Sbjct 96960 GGGATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCA 97019 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || || ||||| || || | || |||||||| Sbjct 97020 ACCTCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 118 bits (130), Expect = 2e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 192297 TAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGAT 192356 ||||| ||| | |||||||| ||||| | ||| | || | |||| ||||| || Sbjct 94778 TAGTTAGATATTGCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAAT 94837 Query 192357 ATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTG 192416 || ||||| || || || ||| | || || | ||||||||| |||||||||||||| || Sbjct 94838 GTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTG 94897 Query 192417 TTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATC 192476 ||||| || || || || ||||| ||||| ||||| || ||||| || | || Sbjct 94898 CTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTC 94957 Query 192477 TGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||| || || | || ||||| || || ||||| || || | || |||||||| Sbjct 94958 GGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||| || | ||| | || | || | ||||| ||| || |||||| Sbjct 95244 ATACCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 95303 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| | || || | ||||||||| |||||||||||||| || ||||| || Sbjct 95304 GACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGA 95363 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| ||||| || ||||| || | || || | ||| Sbjct 95364 GGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCA 95423 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || || ||||| || || | || |||||||| Sbjct 95424 ACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||| || | || | || | || | ||||| ||| || |||||| Sbjct 95016 ATACCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 95075 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| | || || | ||||||||| |||||||||||||| || ||||| || Sbjct 95076 GACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGA 95135 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| ||||| || ||||| || | || || | ||| Sbjct 95136 GGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCA 95195 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || || ||||| || || | || |||||||| Sbjct 95196 ACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||| || | || | ||| | || | ||||| |||||| |||||| Sbjct 95472 ATACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCA 95531 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || | |||||||| |||||||| | ||||| ||||| ||| Sbjct 95532 GACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGT 95591 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| || || || ||||| || | || || | || Sbjct 95592 GGAATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCG 95651 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||| || || || |||| ||||| | || || ||||| Sbjct 95652 ACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||| || | |||||| || | |||| || || || || || || Sbjct 96156 ATACCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCG 96215 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| | || || | |||||||| ||||| || | ||||| |||||||| Sbjct 96216 GACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGC 96275 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| || ||| ||| ||||| || | ||| || | || Sbjct 96276 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCG 96335 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||| || || || || ||||| | || |||||||| Sbjct 96336 ACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| ||| || | || | ||| | || | ||||| |||||| |||||| Sbjct 95700 ATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCA 95759 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || | |||||||| || ||||| | |||||| || || ||| Sbjct 95760 GACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGT 95819 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || || || ||||| || | || || | || Sbjct 95820 GGAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCG 95879 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||| || || || |||| ||||| | || || ||||| Sbjct 95880 ACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| ||| || | ||| || || | |||| ||||| ||||| |||||| Sbjct 96384 ATGCCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCA 96443 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || ||| | || || | ||| || ||||||||||| | | ||| ||||| ||| Sbjct 96444 GACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGT 96503 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || || || || || | || || | || Sbjct 96504 GGGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCA 96563 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| |||||||| || || || || || | || || ||||| Sbjct 96564 ACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 >seq5300 Length=1069934 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||| ||||| | || ||| |||| ||||||||||| |||||||| || | || Sbjct 717928 GATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATAAGTCG 717869 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || ||||||||||| |||||||| |||||||| |||||| || ||||| || || Sbjct 717868 TTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTTCAATGGA 717809 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || | ||||||||| || || || || ||||| || | || || | ||| ||||| Sbjct 717808 GTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAAAAATCTG 717749 Query 192534 CAT 192536 ||| Sbjct 717748 CAT 717746 >seq8311 Length=725843 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || || | ||| ||||| |||||||| | || | ||| || ||| || || || ||| Sbjct 133929 CCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAT 133870 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | |||| |||| ||||| || || ||||||||||| || | || ||||| || || Sbjct 133869 AGAGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGA 133810 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||| ||||| || || ||||| ||||||||| ||| | || || | ||| || Sbjct 133809 ATTCCCTCTTTGTCCTGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACC 133750 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||| ||||| ||||| || | ||||| | || ||||||||| Sbjct 133749 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133702 Score = 120 bits (132), Expect = 6e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| |||||| | || | ||| | || | |||||| ||| ||||| ||| Sbjct 133704 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCA 133645 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | ||| || || || ||||| | | || |||||||| Sbjct 133644 GAAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGA 133585 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||||||||| |||||||| ||| | || |||| ||| Sbjct 133584 GGAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCA 133525 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| ||||| ||||| || | ||||| | || ||||||||| Sbjct 133524 ACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133474 >seq2953 Length=1164165 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || |||||||||||||| || || |||| || || ||||| || || ||||| | || | Sbjct 120053 ATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATCAGTCGC 119994 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| ||||| || || ||||| ||||| || ||| ||| ||||| || | | Sbjct 119993 TGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTTCGATGGTA 119934 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | |||||| || || ||||| || ||||| || | ||||| | || |||||| Sbjct 119933 TCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAAATCTGC 119874 Query 192535 AT 192536 || Sbjct 119873 AT 119872 >seq4549 Length=1308415 Score = 113 bits (124), Expect = 9e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||||| | || || |||||||||||||||| |||||| || ||||| ||||| Sbjct 663274 ACCACCTCGCAAGCGCAACACTAAATGTAAAGTAGACTCTTTTTGAATGTTATAGTCAGA 663333 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| |||| |||||| ||||| ||||| | ||| |||||||| ||||| Sbjct 663334 TAAAGTTCTCCCATCTTCCAGTTGTTTTCCAGCGAAGATCAGTCTTTGTTGATCTGGTGG 663393 Query 192429 TATTCCT 192435 |||||| Sbjct 663394 AATTCCT 663400 >seq8719 Length=610 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 192297 TAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGAT 192356 ||||| ||| | |||||||| ||||| | ||| | || | |||| ||||| || Sbjct 215 TAGTTAGATATTGCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAAT 156 Query 192357 ATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTG 192416 || ||||| || || || ||| | || || | ||||||||| |||||||||||||| || Sbjct 155 GTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTG 96 Query 192417 TTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 ||||| || || || || ||||| ||||| ||||| Sbjct 95 CTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984367826810550