Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7686 91.5 2e-12 >seq7686 Length=992852 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1254374 CACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACG 1254433 |||||||||||||||||| || | | ||| || ||||||||| | || |||| || Sbjct 154754 CACGGCGGTCTGGATCTCCCGAGAGGTGATGGTAGAGCGCTTGTTGTAATGAGCCAATCG 154695 Query 1254434 GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACAT 1254493 ||||||| | ||||| |||| | ||||| ||||| |||||||| ||| Sbjct 154694 CGATGCCTCGGCAGCAATGCGCTCGAAGACATCGTTAACAAAACTGTTCATGATGCTCAT 154635 Query 1254494 CGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||| ||||||| || ||| || || |||||||| || || ||||||||| Sbjct 154634 GGCTTTGCTGGAGATACCGGTGTCAGGATGGACCTGCTTCAGTACTTTGTAGATG 154580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106409398774081