Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq7280 129 7e-25 >seq7280 Length=1514598 Score = 129 bits (142), Expect = 7e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 |||| | |||||| | || ||||| ||||| |||| ||| ||||| |||| |||| Sbjct 1012203 AAGAGTTGTTATGGTTCATCAAAGGATCAACAAATTCTAAAGAATTAGCAGATAAAGGTA 1012262 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 | | | ||| || | |||||||| |||| ||||| |||| || || |||| || | Sbjct 1012263 TACACATCTGGGATAAAAATGGTTCGCGTGCTTTTTTGGATTCCTGTGGCTTTAGCGACA 1012322 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || | |||||||||||||| || | |||||||| |||||||||||| || || ||| Sbjct 1012323 GAGAGGAAGGTGATTTAGGACCTGTCTATGGATTCCAATGGAGACATTACGGTGCAGAAT 1012382 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGG 172612 | | || | || |||||||||| |||||||||| Sbjct 1012383 ACAAAGA-TATGCATACAGATTATGCAGGACAAGG 1012416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632419290874840