Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq8311 134 9e-27 seq3349 114 8e-21 seq5300 102 5e-17 seq2953 100 2e-16 >seq8311 Length=725843 Score = 134 bits (148), Expect = 9e-27 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| ||| ||| ||||| ||||||||||| | Sbjct 133703 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAG 133644 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || |||||||| |||||||||||||| |||||||| || | | Sbjct 133643 AAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAG 133584 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||||| || || |||| | ||| || || | Sbjct 133583 GAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAA 133524 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || |||||||| ||||||||||| ||||| || |||||||| Sbjct 133523 CCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| ||| ||||||||| || |||||||| | Sbjct 133019 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAG 132960 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | || ||||||||||| ||||| |||||||| |||||||| ||| | | Sbjct 132959 AAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAG 132900 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | || || || || | |||| | ||| || |||| Sbjct 132899 GAATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGA 132840 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| || |||||||| || ||||| ||||| |||||||| |||||| Sbjct 132839 CCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATG 132790 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| ||| ||||||||| || |||||||| | Sbjct 133247 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAG 133188 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | || || | ||||||||||||||||||||| |||||||| || | | Sbjct 133187 AAAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAG 133128 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | ||||| ||| || |||| | ||| || || | Sbjct 133127 GAATTCCCTCTTTGTCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAA 133068 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || |||||||| |||| |||||| |||| || |||||||| Sbjct 133067 CCTCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133019 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||||||||| | | |||| |||| ||||| || || || Sbjct 133894 CTCCTTCTGGATGTTGTAGTCCGATAGAGTTCTGCCATCTTCCAACTGCTTGCCAGCAAA 133835 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| |||||||| || | || | ||||| ||||| | ||||| ||| || Sbjct 133834 GATCAAACGTTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGAATTTTGGCTTTTACATT 133775 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||| | ||| || || || |||| || |||||||| ||||||||||| ||||| Sbjct 133774 CTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTAC 133715 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 133714 GAAAATCTGCAT 133703 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| ||| ||||||||| ||||||||||| || || | | | || || Sbjct 133455 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCT 133396 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||||||||||||||| ||||| || || | || | ||||| || || | Sbjct 133395 AATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAGGAATTCCCTCTTTATCCTGG 133336 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| || |||| | ||| || || || |||| || |||||||| Sbjct 133335 ATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCTTA 133276 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| |||||| |||| || |||||||| Sbjct 133275 CCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 >seq3349 Length=644485 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| |||||||||||||| || || || | | || | || Sbjct 97086 AGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCC 97145 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||||||||||||||| || || ||||| || | || | ||| ||||| || Sbjct 97146 TCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCT 97205 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | |||| || ||||||||| || | ||| ||||| Sbjct 97206 TGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTT 97265 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| | ||||| || || ||||||||| Sbjct 97266 TTTCCCGTTAATGTCTTCACGAAAATCTGCATG 97298 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| || | |||| || ||||| || |||||||| |||| |||| |||| Sbjct 95946 AGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGATAACGTGCGACCATCT 96005 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| |||||||| ||||||| || ||||| || | || | || |||||||| Sbjct 96006 TCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 96065 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | ||| |||||||| || | || |||||| Sbjct 96066 TGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACTTCCAACGTGATGGTC 96125 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||| ||||| ||||| Sbjct 96126 TTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| |||| || ||||| ||||| || || || ||| |||| | || Sbjct 95034 AGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCT 95093 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| | || |||||| || | || | ||||| ||||| Sbjct 95094 TCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCT 95153 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| || || || || || | || || || || || | || |||| Sbjct 95154 TGGATTTTCGCCTTAAC--ATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGG 95211 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || | ||||| || ||||||||||| Sbjct 95212 TCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| |||| || ||||| ||||| || || || ||| |||| | || Sbjct 95262 AGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCT 95321 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| | || |||||| || | || | ||||| ||||| Sbjct 95322 TCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCT 95381 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| || || || || || | || || || || || | || |||| Sbjct 95382 TGGATTTTCGCCTTAAC--ATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGG 95439 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || | ||||| || ||||||||||| Sbjct 95440 TCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 >seq5300 Length=1069934 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || || ||||||||||| || || | || |||| |||| ||| || || || || || Sbjct 717933 TTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATA 717874 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 ||||||||||| || | || | || ||||| || | ||||| || || | | Sbjct 717873 AGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTTCA 717814 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || || ||| ||| || || || | |||||| ||||| |||||||| ||||| ||||| Sbjct 717813 ATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAAAA 717754 Query 34970 ATCTGCATGATAGT 34983 |||||||| || || Sbjct 717753 ATCTGCATAATGGT 717740 >seq2953 Length=1164165 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || ||||||||||| || |||| | ||| |||| || | || || |||||||||||| Sbjct 120059 TTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATC 120000 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 ||||| || || ||| | || | |||||| ||||| | || || ||| || | | Sbjct 119999 AGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTTCG 119940 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || | || || || || || | ||| || ||||| ||||||||||| || || || Sbjct 119939 ATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAA 119880 Query 34970 ATCTGCATGA 34979 |||||||||| Sbjct 119879 ATCTGCATGA 119870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325657500294767