Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq8311 156 3e-33 seq3349 143 2e-29 seq5300 122 7e-23 seq8719 118 8e-22 seq2953 107 1e-18 >seq8311 Length=725843 Score = 156 bits (172), Expect = 3e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | |||||| |||| |||||| ||||| ||||| || |||||||| || | Sbjct 133702 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGA 133643 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || ||||| ||||| || | |||| | ||||||||| || || Sbjct 133642 AAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGG 133583 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||| ||||||||||||| |||| || ||| | |||| |||||||| ||| || Sbjct 133582 AATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAAC 133523 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||| || || || || || | |||||| || || ||||||||| Sbjct 133522 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133474 Score = 140 bits (154), Expect = 2e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| |||||||| || || || ||||| || |||| | || | ||| || Sbjct 133911 ACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGATAGAGTTCTGCCATCTTCC 133852 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | || ||||||||| | ||||| | |||||||||||| ||||| ||||||||||| || Sbjct 133851 AACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGAATTCCCTCTTTGTCCTG- 133793 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| ||| | |||| |||||||| ||| || |||||||| || || || Sbjct 133792 AATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCTT 133733 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || | |||||| || || ||||||||| Sbjct 133732 ACCCGTGAGGGTTTTTACGAAAATCTGCATT 133702 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | |||||| |||| |||||| ||||| || || || || ||||| || | Sbjct 133246 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGA 133187 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||| || || || | |||| | |||||||||||| || Sbjct 133186 AAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAGG 133127 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||||||||| || | ||| ||| ||| | |||| |||||||| ||| || Sbjct 133126 AATTCCCTCTTTGTCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAAC 133067 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||| || || || || | | |||| | || || ||||||||| Sbjct 133066 CTCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCATT 133018 >seq3349 Length=644485 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||| || ||||||||||| || || ||||| || | | |||||| | Sbjct 95943 CGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGATAACGTGCGACCA 96002 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||||||||| || ||| | |||||||| ||||||||||| || || || || ||| Sbjct 96003 TCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATTCCTTCCTTG 96062 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||||||| |||| | |||||||||| || ||||| | || || Sbjct 96063 TCCTG-AATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACTTCCAACGTGAT 96121 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || || ||||| Sbjct 96122 GGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || | |||||||| ||||||||||||||||| ||||| | Sbjct 94791 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 94850 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || |||||||| || ||| | || |||||||||||||| || || Sbjct 94851 AAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 94910 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | ||| || ||| | || | ||||| || ||| || Sbjct 94911 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 94970 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || || ||||| || || || || |||||||| Sbjct 94971 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||||| ||||||||||| || ||||| ||||| | | |||||| Sbjct 95031 CGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCG 95090 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| || ||| | || |||||||||||||| || || |||||||||||| Sbjct 95091 TCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTG 95150 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| | || | ||||| || ||| || || | || || Sbjct 95151 TCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATG 95210 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || ||||| || || || || |||||||| Sbjct 95211 GTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 136 bits (150), Expect = 3e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||||||| || || ||||||||||| |||||||| || | | |||||| Sbjct 96854 ACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGATAACGTGCGACC 96913 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | |||||||| || |||||||| || || || || || Sbjct 96914 ATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTT 96973 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | |||||| |||| | |||||| ||| || || || | || | Sbjct 96974 ATCCTG-AATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGA 97032 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || ||||| || || || || |||||||| Sbjct 97033 TGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||||| ||||||||||| || ||||| ||||| | | |||||| Sbjct 95259 CGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCG 95318 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| || ||| | || |||||||||||||| || || |||||||||||| Sbjct 95319 TCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTG 95378 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| | || | ||||| || ||| || || | || || Sbjct 95379 TCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATG 95438 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || ||||| || || || || |||||||| Sbjct 95439 GTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 122 bits (134), Expect = 7e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| || || ||||| || ||||| || || || | | || || Sbjct 96627 CGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCG 96686 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || ||| | |||| ||| |||||||| || ||||| || |||||| Sbjct 96687 TCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTG 96746 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||| | || ||| | || | ||||| || ||| ||||| | || || Sbjct 96747 TCTTG-AATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAAT 96805 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | |||||| || || |||||||| Sbjct 96806 CGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||| || ||||||||||| || || || ||||| | | ||| || | Sbjct 95487 CGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCA 95546 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || ||| | |||| || |||||||| || ||||| || |||||| Sbjct 95547 TCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTG 95606 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | |||||| | || | ||||| ||| || || || | || || Sbjct 95607 TCTTG-AATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAAT 95665 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||| ||||| || || || ||||| Sbjct 95666 CGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 107 bits (118), Expect = 1e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| ||| || ||||||||||| || || || ||||| | | ||| || | Sbjct 95715 CGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCA 95774 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || || | |||| ||| ||||| || || ||||| || ||||| Sbjct 95775 TCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTCCTTCTTTA 95834 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | |||||| | || | ||||| ||| || || || | || || Sbjct 95835 TCTTG-AATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAAT 95893 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||| ||||| || || || ||||| Sbjct 95894 CGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || || ||||| || ||||| || |||||||| || || | | ||||| Sbjct 96171 CGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCG 96230 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || ||| |||| | || |||||||| ||||| || || |||||| Sbjct 96231 TCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTG 96290 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | ||| ||| | || | || || || || || || | || || Sbjct 96291 TCTTG-AATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGACCTCCAACGTGAT 96349 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || || |||||||| Sbjct 96350 GGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 >seq5300 Length=1069934 Score = 122 bits (134), Expect = 7e-23 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 ||||||| |||||||| || | || || || ||| || | ||||||||||||| | | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTT 29715 | | || ||||||||| || ||||| || || || ||||| |||||| | || ||| || Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTG-AATTTTAGCCTTCACATTT 717817 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | | |||||| ||||||||| || |||||||| || || || | || || ||| Sbjct 717816 TCAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACA 717757 Query 29776 AATATCTGCAT 29786 || |||||||| Sbjct 717756 AAAATCTGCAT 717746 >seq8719 Length=610 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || | |||||||| ||||||||||||||||| ||||| | Sbjct 202 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 143 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || |||||||| || ||| | || |||||||||||||| || || Sbjct 142 AAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 83 Query 29680 ATACCCTCTTTGTCTTGTAATTT 29702 ||||||||||||||||| | ||| Sbjct 82 ATACCCTCTTTGTCTTGGATTTT 60 >seq2953 Length=1164165 Score = 107 bits (118), Expect = 1e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 ||||||||||||||||||| | | || || ||| || | |||||||| || | | Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGA 120002 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTT 29715 ||| || || ||||| || ||||| |||||||||||||| ||| || | ||| ||| || Sbjct 120001 TCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTG-AATCTTAGCTTTCACATTT 119943 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | || || || |||||| || || || || || || || || | |||||| || Sbjct 119942 TCGATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACG 119883 Query 29776 AATATCTGCAT 29786 || |||||||| Sbjct 119882 AAAATCTGCAT 119872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385177448618913