Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq7280 129 7e-25 >seq7280 Length=1514598 Score = 129 bits (142), Expect = 7e-25 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 168523 TTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 168582 || |||| | |||||| | || ||||| ||||| |||| ||| ||||| |||| || Sbjct 1012200 TTGAAGAGTTGTTATGGTTCATCAAAGGATCAACAAATTCTAAAGAATTAGCAGATAAAG 1012259 Query 168583 GTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCG 168642 || | | | ||| | | |||||||| |||| ||||| |||| ||||| |||| || Sbjct 1012260 GTATACACATCTGGGATAAAAATGGTTCGCGTGCTTTTTTGGATTCCTGTGGCTTTAGCG 1012319 Query 168643 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTC 168702 | ||| | |||||||||||||| || | |||||||| |||||||||||| || || Sbjct 1012320 ACAGAGAGGAAGGTGATTTAGGACCTGTCTATGGATTCCAATGGAGACATTACGGTGCAG 1012379 Query 168703 AATATATTGACTGTG-ATACAGATTACACCGGACAAGG 168739 |||| | || | || |||||||||| | |||||||| Sbjct 1012380 AATACAAAGA-TATGCATACAGATTATGCAGGACAAGG 1012416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106992070040