Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1306 105 9e-18 seq6770 104 3e-17 seq4201 104 3e-17 seq2609 100 4e-16 seq8722 98.7 1e-15 seq6447 98.7 1e-15 seq2671 98.7 1e-15 >seq1306 Length=384595 Score = 105 bits (116), Expect = 9e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||| Sbjct 260336 TTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 260395 Query 8717 CCCCGACGAGGAGCAG 8732 ||||| ||||||| || Sbjct 260396 CCCCGTCGAGGAGTAG 260411 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139348 CACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407 ||| |||||||| |||||| |||||||||||||||||| | |||| |||||||| |||| Sbjct 260413 CACTACTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 260354 Query 139408 CACTATACTAACGAGGA 139424 |||||||||| |||||| Sbjct 260353 CACTATACTATCGAGGA 260337 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 260337 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 260396 Query 11789 CCCGACGAGGAG 11800 |||| ||||||| Sbjct 260397 CCCGTCGAGGAG 260408 >seq6770 Length=222752 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 ||||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||| Sbjct 217764 TATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 217823 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 217824 TTCCCCGTCGGGGAG 217838 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||| Sbjct 56375 TAATCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 56434 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 56435 TTCCCCGTCGGGGAG 56449 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||| | | ||||||||||||||||||||| Sbjct 53396 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGGCACGCGGGAGACCGGGGTTCGATTC 53337 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 53336 CCCGTCGGGGAG 53325 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 56449 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 56390 Query 139413 TACTAACGAGGATT 139426 ||||| |||||||| Sbjct 56389 TACTATCGAGGATT 56376 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 56378 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 56437 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 56438 CCCGTCGGGGAGG 56450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 217767 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 217826 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 217827 CCCGTCGGGGAG 217838 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 217838 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 217779 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 217778 TACTATCGAGGA 217767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | | || |||||||| |||||||| Sbjct 53324 ACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGCCAGGCGGGGATACTAACCACT 53383 Query 139412 ATACTAACGAGGA 139424 |||||| |||||| Sbjct 53384 ATACTATCGAGGA 53396 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||| | | ||||||||||||||||||||| Sbjct 53396 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGGCACGCGGGAGACCGGGGTTCGATTC 53337 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 53336 CCCGTCGGGGAG 53325 >seq4201 Length=319496 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 138063 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 138122 Query 8718 CCCGACGAGGAG 8729 |||| ||||||| Sbjct 138123 CCCGTCGAGGAG 138134 Score = 98.7 bits (108), Expect = 1e-15 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 138063 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 138122 Query 11789 CCCGACGAGGAGGGAGGTT 11807 |||| |||||||| | ||| Sbjct 138123 CCCGTCGAGGAGGAATGTT 138141 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||||| |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 138134 CTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 138075 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 138074 TACTATCGAGGA 138063 >seq2609 Length=418247 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||| Sbjct 28574 TTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 28515 Query 8717 CCCCGACGAGGAG 8729 ||||| || |||| Sbjct 28514 CCCCGTCGGGGAG 28502 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 28268 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28209 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 28208 CCCGTCGGGGAG 28197 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| ||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 27956 TCCTCGATAGTATAGTGGTTAGTACCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28015 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 28016 CCCGTCGGGGAG 28027 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 28573 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28514 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 28513 CCCGTCGGGGAGG 28501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||| Sbjct 28196 ACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 28255 Query 139412 ATACTAACGAGGA 139424 |||||| |||||| Sbjct 28256 ATACTATCGAGGA 28268 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 28268 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28209 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 28208 CCCGTCGGGGAG 28197 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 28502 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 28561 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 28562 TACTATCGAGGA 28573 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | |||| ||||| || |||||||| Sbjct 28028 ACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTACTAACCACT 27969 Query 139412 ATACTAACGAGGA 139424 |||||| |||||| Sbjct 27968 ATACTATCGAGGA 27956 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 27956 TCCTCGATAGTATAGTGGTTAGTACCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28015 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 28016 CCCGTCGGGGAG 28027 >seq8722 Length=295648 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 220152 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 220211 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 220212 CCCGCCGGGGAG 220223 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 220223 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 220164 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 220163 TACTACCGAGGAT 220151 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 220152 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 220211 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 220212 CCCGCCGGGGAG 220223 >seq6447 Length=1093865 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 787872 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 787931 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 787932 CCCGCCGGGGAG 787943 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 787943 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 787884 Query 139413 TACTAACGAGGATT 139426 ||||| |||||||| Sbjct 787883 TACTACCGAGGATT 787870 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 787872 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 787931 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 787932 CCCGCCGGGGAGG 787944 >seq2671 Length=793039 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 333317 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 333258 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 333257 CCCGTCGGGGAG 333246 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||| Sbjct 333244 AACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 333303 Query 139411 TATACTAACGAGGA 139424 ||||||| |||||| Sbjct 333304 TATACTATCGAGGA 333317 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 333317 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 333258 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 333257 CCCGTCGGGGAG 333246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652772228139920