Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3349 140 3e-28 seq6989 89.7 5e-13 seq8311 82.4 7e-11 >seq3349 Length=644485 Score = 140 bits (154), Expect = 3e-28 Identities = 158/210 (75%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| || || ||||| || ||||||||| || || ||| |||||||| Sbjct 97092 AAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGT--ACGTCCGTCCTCGA 97149 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | ||||| || ||| | ||||| |||||||| ||||| ||||| |||||||| || | Sbjct 97150 GTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAA 97209 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||| | | ||| | |||||||| || ||| || |||| ||||| |||||| | Sbjct 97210 TCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTTC 97269 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGG 133662 | || | || || |||||||||||||||| Sbjct 97270 CCGTTAATGTCTTCACGAAAATCTGCATGG 97299 Score = 118 bits (130), Expect = 1e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGA 133512 || || | ||| || |||||||||||||||||||| || || ||| ||| || | Sbjct 96408 AAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGACAAAGT--ACGTCCGTCTTCAA 96465 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | ||||| || || | ||||| |||||||| ||||| ||||| |||||||| || | Sbjct 96466 GTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGAA 96525 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||| | | ||| | |||||||| | ||| || || | |||| |||||| | Sbjct 96526 TCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTTTCC 96585 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||| || ||||| || ||||| Sbjct 96586 CCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| ||||||||||| || || | | | |||||||||| Sbjct 95498 ATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCA-TCCTCGAGCT 95556 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || ||||| | || |||| |||||| ||||| || || ||||| ||||| |||| Sbjct 95557 GTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTGTCTTGAATCT 95616 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||||| | ||| || || | || | || || |||| Sbjct 95617 TCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTTCCGG 95676 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || ||||| |||||||| |||||| Sbjct 95677 TTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| ||||||||||| || || | | | |||||||||| Sbjct 95726 ATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCA-TCCTCGAGCT 95784 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || |||||| | || || | |||||||||||| || || ||||| || || |||| Sbjct 95785 GTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTCCTTCTTTATCTTGAATCT 95844 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||||| | ||| || || | || | || || |||| Sbjct 95845 TCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTTCCGG 95904 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || ||||| |||||||| |||||| Sbjct 95905 TTAGCGTTTTGACGAAAATTTGCATG 95930 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| || || ||||| || ||||| ||| || ||| |||||||||| Sbjct 96180 AAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGC 96239 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || ||||| | ||||||| |||||| || || ||||| ||||| ||||| ||| Sbjct 96240 TGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGAATC 96299 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | ||| | || |||| || ||| || || | |||| ||| || || Sbjct 96300 TTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTTCCCC 96359 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| |||||| ||||||||||||||| Sbjct 96360 GTCAAAGTTTTCACGAAAATCTGCATG 96386 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || || ||||| |||||||| || || || |||||||||| Sbjct 96636 AAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCGAGC 96695 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || ||||| | || || | |||||| || || || |||||||| ||||| ||| Sbjct 96696 TGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTC-TTGAAT 96754 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| | ||| | | ||||| ||||| | | ||||| || | ||| | ||||| || Sbjct 96755 TTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTTCC 96814 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||| |||||||||||||| Sbjct 96815 AGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| ||||| || || | |||| ||| | || ||||| | Sbjct 95954 ATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGATAACGTGCGACCA-TCTTCGAGTT 96012 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || | || | | |||||| || || ||||| ||||||||||| |||| Sbjct 96013 GTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATCT 96072 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | |||| | |||| ||||| | | ||| || || | |||| ||| || || | Sbjct 96073 TCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACTTCCAACGTGATGGTCTTTCCTG 96132 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| |||||||| || ||||| Sbjct 96133 TCAAAGTCTTTACGAAGATTTGCAT 96157 >seq6989 Length=241196 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 148272 AACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCG 148331 ||||| |||| | ||| || | | || | ||||| || ||| |||| |||||| Sbjct 6472 AACTCTCCGGACAACACACGTCTTACGTAGATATTGCTGGTGTACGCCTCAATGGACTCG 6413 Query 148332 TTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTG 148391 |||||||||||||| ||||| |||| || || ||||| || | || |||||||| Sbjct 6412 TTGTTGCCCAAAATTTGCGCAGTCGACGCGGTTGGCATCGGTGCGATCAAGAGCGAGTTT 6353 Query 148392 CGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGT 148451 | || ||| | || ||||| ||||| | |||| ||||| | || ||| Sbjct 6352 CTCACTCCGTGTTTCGCGATTTTCGTCTTCAACTCATCCCAATCCCATAAATCCGTCGGC 6293 Query 148452 GTCACGTTCCACATGTCGTACTGCAGAAT 148480 | || |||||||||||||| |||||||| Sbjct 6292 TTAACATTCCACATGTCGTATTGCAGAAT 6264 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 ||||| ||||||||| |||| ||||||||| || || || || | |||||| || Sbjct 5546 GTTCAAGGCGATAGATGCTAAATTGCACACAGCTACTTCTTCGGGACTGGAGTACTCGAC 5487 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCA 148911 ||||| | |||||||||||||||||||||| ||||| Sbjct 5486 AATCTCTGTGCACAGATTGCTGCATTTGATCGTGCCCA 5449 >seq8311 Length=725843 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| ||| | || || || ||||| || ||||| || ||||| ||| Sbjct 133629 TCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGGAATACCTTCTTTG 133570 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || || ||| ||| | | ||| | ||||| | | || || || | |||| | Sbjct 133569 TCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAACCTCAAGAGTGATG 133510 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||||||||||||||| Sbjct 133509 GTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483367061735320