Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3349 132 3e-26 seq8719 102 5e-17 seq8311 89.7 3e-13 seq5300 82.4 5e-11 >seq3349 Length=644485 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | ||||| || || ||| ||||| || ||||||||||| || Sbjct 95018 ACCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 95077 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| |||| || | |||||| || ||||| || || | |||||||| | || Sbjct 95078 CAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 95137 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| |||||| | | ||||| || | ||||||| || ||| | Sbjct 95138 GATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 95196 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || |||||||| || || || |||||||||||| Sbjct 95197 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95246 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | || | || || || |||||||| |||||||||||||| Sbjct 94791 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 94850 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| || | |||||| || ||||| || || | |||||||| | || Sbjct 94851 AAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 94910 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| |||||||| |||||| | | ||||| || | ||||||| || ||| || Sbjct 94911 ATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAAC 94969 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || |||||||| || || || |||||||||||| Sbjct 94970 CTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95018 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||| || || ||| ||||| || ||||||||||| || Sbjct 95246 ACCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 95305 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| |||| || | |||||| || ||||| || || | |||||||| | || Sbjct 95306 CAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 95365 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| |||||| | | ||||| || | ||||||| || ||| | Sbjct 95366 GATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 95424 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || |||||||| || || || |||||||||||| Sbjct 95425 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95474 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| || || || || ||||| || || | || ||| |||| || Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| || ||||| |||| | ||||||||| | || | ||||||||||| | Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGA 96752 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 |||||| ||| |||| || | |||||| || |||||| || | || |||||||| Sbjct 96753 ATTTTCGCCTTC-ACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTT 96811 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || || ||||||||| Sbjct 96812 TCCAGTCAGGGTTTTGACGAAAATCTGCATA 96842 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| ||||| |||||||| ||||| || ||||| Sbjct 96842 ACCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGA 96901 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || || | ||||||||| ||||| ||||| | ||| ||||| | || Sbjct 96902 TAACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGG 96961 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||||| || || ||| ||| || | ||| ||| |||||| | || | Sbjct 96962 GATTCCTTCCTTATCCTGAATCTTCGCCTTGA-CATTTTCAATAGTGTCGGAAGCCTCAA 97020 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || || ||||| || || || |||||||||||| Sbjct 97021 CCTCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCATA 97070 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | ||||| ||| || ||| ||||| || || |||||||| || Sbjct 95474 ACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGA 95533 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || | ||||| || ||||| |||| | ||||||||| | || Sbjct 95534 CAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGG 95593 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| ||| | | |||| || | ||||||| | || | Sbjct 95594 AATTCCTTCTTTGTCTTGAATCTTC-GCCTTGACATTCTCGATGGTGTCGGAAGCCTCGA 95652 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||| ||||| || || |||| |||||| || || || ||||| Sbjct 95653 CCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | || | ||||| ||| || ||| ||||| || || || || || || Sbjct 95931 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGAT 95990 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || || | ||||||||||||||| ||||| | ||||||||| | || Sbjct 95991 AACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 96050 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| ||| | || |||| || | ||||| | || || Sbjct 96051 ATTCCTTCCTTGTCCTGAATCTTC-GCTTTGACATTTTCAATAGTGTCAGAAGCCTCGAC 96109 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || ||||| || || ||||| ||||| |||||| Sbjct 96110 TTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCATA 96158 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| ||||| || |||||| |||| || | ||||| || ||||| Sbjct 96195 TCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAAT 96254 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | | ||||||||| |||| | ||||||||||| ||| || |||| |||| Sbjct 96255 ATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTC-ACATT 96313 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||| ||| | || || || | |||||| || || || || || ||||| || Sbjct 96314 CTCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCAC 96373 Query 33738 AAAGATCTGCAT 33749 || |||||||| Sbjct 96374 GAAAATCTGCAT 96385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || || || || |||||||||||||| Sbjct 97070 ACCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGA 97129 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || ||| |||| || | ||| |||||||| || || | |||||||||||| | || Sbjct 97130 CAAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGG 97189 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || ||| || || | || | || | |||||| | || | Sbjct 97190 GATCCCTTCCTTATCTTGAATCTT-TGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGA 97248 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | ||||| ||||| || ||||| || || || || |||||||| || Sbjct 97249 CTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATGGT 97300 Score = 82.4 bits (90), Expect = 5e-11 Identities = 165/241 (68%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||| | || | ||||| || || || ||||| ||||| Sbjct 96375 AAAATCTGCATGCCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATA 96434 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | || ||| |||| || | ||| ||||| ||||| || | ||||||| Sbjct 96435 TTGTAATCAGACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGC 96494 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||||| | || | ||||| || || ||| || || | || | || | ||||| Sbjct 96495 TGATCGGGTGGGATCCCTTCCTTATCTTGAATCTT-TGCCTTCACGTTCTCGATCGTGTC 96553 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | ||||| ||||| || || || || || || ||||| ||||| Sbjct 96554 GGAAGCCTCAACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Query 33750 A 33750 | Sbjct 96614 A 96614 >seq8719 Length=610 Score = 102 bits (112), Expect = 5e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | || | || || || |||||||| |||||||||||||| Sbjct 202 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 143 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| || | |||||| || ||||| || || | |||||||| | || Sbjct 142 AAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 83 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| |||||||| |||||| | | ||||| || | ||||||| || ||| || Sbjct 82 ATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAAC 24 Query 33702 GTCAACCGTGATCGTTTTACCTG 33724 || | |||||| || || |||| Sbjct 23 CTCCAACGTGATGGTCTTTCCTG 1 >seq8311 Length=725843 Score = 89.7 bits (98), Expect = 3e-13 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || |||| | ||| | |||| ||| || ||| |||||| || ||| Sbjct 133713 AAAATCTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATG 133654 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || || || || || || | | || || | ||| || ||||| || |||| || ||| Sbjct 133653 TTATAGTCAGAAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGC 133594 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||||| | || | |||||||||||| ||||| || | |||| || | ||||| Sbjct 133593 TGATCAGGAGGAATACCTTCTTTGTCTTGTATTTT-TGCCTTTACATTCTCTATTGTGTC 133535 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||| ||||| || ||||| || | |||||||| || |||||||| Sbjct 133534 AGACGCTTCAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 >seq5300 Length=1069934 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 ||||||| ||||| || || || || || ||| | || ||||||||||| || ||||||| Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 | | || |||||||| | || | ||||| || || |||||| ||| |||| Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTC-ACATTT 717817 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | || ||| | ||| || || | || || || ||||| || | || || ||| Sbjct 717816 TCAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACA 717757 Query 33739 AAGATCTGCATA 33750 || ||||||||| Sbjct 717756 AAAATCTGCATA 717745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328668373930560