Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3349 127 5e-24 seq8311 125 2e-23 seq8719 98.7 2e-15 seq4549 86.0 1e-11 >seq3349 Length=644485 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||||||||| || ||||| ||||| || ||||| || || ||| ||||| |||| Sbjct 95915 CAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCCGACACCATCGAGAA 95856 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||||||| || ||| || ||||| ||||| Sbjct 95855 TGTCAAGGCGAAGATTCAAGATAAAGAAGGAATTCCACCCGACCAGCAGAGACTGATCTT 95796 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || ||| | || |||||| |||| || | |||||||| |||||||||| || Sbjct 95795 CGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTGATTACAATATCCAGAAAGAATC 95736 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || || || | | |||||| Sbjct 95735 CACCCTCCATCTGGTGCTTCGGCTTCGA 95708 Score = 118 bits (130), Expect = 3e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||||||||| || ||||| ||||| || ||||| || || ||| ||||| |||| Sbjct 95687 CAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCCGACACCATCGAGAA 95628 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||||||| || || || || || ||||| Sbjct 95627 TGTCAAGGCGAAGATTCAAGACAAAGAAGGAATTCCACCCGATCAGCAGAGGCTGATCTT 95568 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || ||| | || |||||| |||| || | |||||||| |||||||||| || Sbjct 95567 TGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTGATTACAATATCCAGAAAGAATC 95508 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || || || | |||||||| Sbjct 95507 CACCCTCCATCTGGTGCTTCGACTTCGA 95480 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||||||||| || ||| ||||| |||| || ||| | Sbjct 96589 ACGGGGAAAACCATCACTTTGGAAGTTGAGGCTTCCGACACGATCGAGAACGTGAAGGCA 96530 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || || || | || ||||| || |||||| Sbjct 96529 AAGATTCAAGATAAGGAAGGGATCCCACCCGATCAGCAGCGTCTCATCTTTGCTGGAAAG 96470 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | ||||| ||| | |||||| | |||||||| | |||||||| ||||| |||||| Sbjct 96469 CAACTTGAAGACGGACGTACTTTGTCTGATTACAATATACAGAAAGAATCTACCCTTCAC 96410 Query 206374 CTTGTTTTGAGACTTCGA 206391 | || | | |||||| Sbjct 96409 TTGGTACTTCGGCTTCGA 96392 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || ||||||||||| || |||||||||||| || ||| Sbjct 96838 CAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCAGAC 96779 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || |||||||| |||||||| ||| || || || Sbjct 96778 ACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAGCAG 96719 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || || ||| | || || ||| | |||||| | || ||||| | Sbjct 96718 AGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAGACTACAATATT 96659 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || |||||||| || | || | ||||||| Sbjct 96658 CAGAAGGAATCTACTCTGCATTTGGTACTCCGACTTCG 96621 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || |||||||| ||||| | ||||| || || ||||| |||| || ||| | Sbjct 97273 ACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCCGACACGATCGAGAACGTGAAGGCA 97214 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || || || | || ||||||||||||||| Sbjct 97213 AAGATTCAAGATAAGGAAGGGATCCCACCCGATCAGCAGCGTCTCATCTTCGCCGGAAAG 97154 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || || ||| | |||||| ||||||||||| | ||||| || ||||| |||||| Sbjct 97153 CAACTCGAGGACGGACGTACTTTGTCCGATTACAACATTCAGAAGGAATCTACCCTTCAC 97094 Query 206374 CTTGTTTTGAGACTTCGA 206391 | || | |||||||| Sbjct 97093 TTGGTGCTTCGACTTCGA 97076 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 |||||||| || ||||| ||||| || ||| || ||||| |||| || ||| Sbjct 94993 ACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCG 94934 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || ||||| ||||| || || || || |||||| | ||||| || || || Sbjct 94933 AAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAA 94874 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | ||||| ||| | || ||| ||||||||||| | || ||||| ||||| |||||| Sbjct 94873 CAACTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCAC 94814 Query 206374 CTTGT 206378 ||||| Sbjct 94813 CTTGT 94809 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || ||||| ||||| || || || || || |||| Sbjct 96370 AAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCCGATACCATCGAGAAT 96311 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||||||||| ||||||||||| ||| || || || || || || Sbjct 96310 GTGAAAGCTAA-GATTCAAGACAAAGAAGGAATCCCGCCTGATCAGCAGAGGCTCATATT 96252 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || ||| | || || ||| | ||| || |||| |||||| | ||||| || || Sbjct 96251 TGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAACATTCAGAAGGAATC 96192 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| |||||| | || | |||||||| Sbjct 96191 TACCCTTCACTTAGTACTTCGACTTCGA 96164 >seq8311 Length=725843 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || |||||| | || || ||| ||||||||| | || Sbjct 133490 AAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTCTGACACAATAGAGAAT 133549 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||| || ||||| |||||||| ||| || || ||| | || |||||| Sbjct 133550 GTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCAGCAACGCCTGATCTTC 133609 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | |||||||| || ||| | | || || ||| ||||||||||||| Sbjct 133610 GCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAACATCCAGAAAGAGTCC 133669 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| || ||| || | |||||| Sbjct 133670 ACACTTCATCTGGTTCTGCGTCTTCGA 133696 Score = 118 bits (130), Expect = 3e-21 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAA-AACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| | || ||| ||| | || || || |||||| | || || ||| ||||| Sbjct 133250 CAGAT-TTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATCTGA 133308 Query 206232 CACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || ||||| || ||| || || || ||||| |||||| ||||| | Sbjct 133309 CACAATAGAGAATGTAAAAGCTAAA-ATCCAGGATAAAGAGGGAATTCCTCCGGATCAAC 133367 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 || | || ||||||||||||||||| || ||||| || || ||| | | || || ||| Sbjct 133368 AACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAACA 133427 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||| ||||| || ||||| || |||||| | |||||| Sbjct 133428 TCCAGAAGGAGTCCACACTTCATCTGGTTTTGCGTCTTCGA 133468 Score = 114 bits (126), Expect = 3e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || |||||| | || || ||| ||||||||| | || Sbjct 133718 AAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCATCTGACACAATAGAGAAT 133777 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| ||||| || ||||| |||||| ||||| ||| | | ||||| Sbjct 133778 GTAAAAGCCAAA-ATTCAGGACAAAGAGGGAATTCCTCCGGATCAGCAACGTTTGATCTT 133836 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || ||| | | || |||||| ||||||| ||||| Sbjct 133837 TGCTGGCAAGCAGTTGGAAGATGGCAGAACTCTATCGGACTACAACATCCAGAAGGAGTC 133896 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || | || || ||||||| Sbjct 133897 CACGCTGCATTTAGTCTTACGACTTCG 133923 Score = 109 bits (120), Expect = 1e-18 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAA-AACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| | || ||| ||| | || || || |||||| | || || ||| ||||| Sbjct 133022 CAGAT-TTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATCTGA 133080 Query 206232 CACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || ||||| || ||| || || || ||||| |||||| ||||| | Sbjct 133081 CACAATAGAGAATGTAAAAGCTAAA-ATCCAGGACAAAGAGGGAATTCCTCCGGATCAGC 133139 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 || | || ||||||||||||||||| || ||||| || || ||| | | || || || Sbjct 133140 AACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAATA 133199 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||| ||||| || ||||| || ||| || | |||||| Sbjct 133200 TCCAGAAGGAGTCCACACTTCATCTGGTTCTGCGTCTTCGA 133240 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | |||||| || ||||| || ||||| ||||||| |||||||||| | ||| Sbjct 133468 TCGAAGACGCAAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAAAGAGT 133409 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || || ||||| | ||||||||||||||||| || ||||||||| Sbjct 133408 TCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGA 133363 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| || ||||| || ||||||||||||| |||||||||| | ||| Sbjct 133696 TCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGT 133637 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || |||||||| || ||||| ||||||||||| || ||||| ||| Sbjct 133636 TCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGA 133591 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| || ||||| || ||||| ||||||| ||||||||||| | ||| Sbjct 133012 TCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGT 132953 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || || |||||||| ||||| ||||| ||||| || ||||| ||| Sbjct 132952 TCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGA 132907 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||| || ||||| || ||||| ||||||| ||||||||||| | ||| Sbjct 133240 TCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGT 133181 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || || ||||| | ||||||||||||||||| || ||||| ||| Sbjct 133180 TCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGA 133135 >seq8719 Length=610 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 ||||||| || ||||| ||||| || ||| || ||||| |||| || ||| | Sbjct 1 CAGGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGA 60 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 | || ||||| ||||| || || || || |||||| | ||||| || || || | Sbjct 61 AAATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAAC 120 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | | ||||| ||| | || ||| ||||||||||| | || ||||| ||||| ||||||| Sbjct 121 AACTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCACC 180 Query 206375 TTGT 206378 |||| Sbjct 181 TTGT 184 >seq4549 Length=1308415 Score = 86.0 bits (94), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 204775 AGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 204834 |||||||||||| || | |||||||||| ||||| || ||||||||||| || ||||| Sbjct 663304 AGTAGACTCTTTTTGAATGTTATAGTCAGATAAAGTTCTCCCATCTTCCAGTTGTTTTCC 663363 Query 204835 GGCGAAGATAAGCCGTTGTTGA 204856 |||||||| || | ||||||| Sbjct 663364 AGCGAAGATCAGTCTTTGTTGA 663385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181686141491453