Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3349 107 2e-18 seq2953 105 6e-18 seq6989 86.0 6e-12 >seq3349 Length=644485 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || || || ||||| |||||||| || || || || ||| Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | | |||| || | ||| ||||| || || ||||||||||| || | Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGA 96752 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| |||| | || | || || | | |||||||| | || | |||||| Sbjct 96753 ATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTT 96812 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| ||||| | |||||||||||| Sbjct 96813 CCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||||||| || || || || |||||||||||||| | | Sbjct 96192 GATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCA 96251 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||| ||||| || || || |||||||| || ||| || ||||| Sbjct 96252 AATATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACA 96311 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | ||| || || | ||| | || || || |||| |||||| Sbjct 96312 TTCTCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTC 96371 Query 132110 ATGAAAATCTGCATG 132124 | ||||||||||||| Sbjct 96372 ACGAAAATCTGCATG 96386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || || || ||||||||||| ||| || ||||| || ||| Sbjct 97089 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCG 97148 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || |||| |||| |||||||| ||||| || || || ||||| ||||| | Sbjct 97149 AGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGA 97208 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| |||| | || | || |||| | ||| ||||||| || | ||||| Sbjct 97209 ATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTT 97268 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || | || || | ||||||||||||| Sbjct 97269 CCCGTTAATGTCTTCACGAAAATCTGCATG 97298 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | || ||||| || || ||||| || || ||| || ||| ||| Sbjct 95493 ACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTCG 95552 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | | |||| || | ||| ||||| || || || |||||||| || | Sbjct 95553 AGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTTGTCTTGA 95612 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || |||| | ||| || || | ||| | ||| || Sbjct 95613 ATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTT 95672 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || ||||| | |||||| |||||| Sbjct 95673 CCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | || ||||| || || ||||| || || ||| || ||| ||| Sbjct 95721 ACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTCG 95780 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | |||| || | ||| || || || || || ||||||||||| | Sbjct 95781 AGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTCCTTCTTTATCTTGA 95840 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || |||| | ||| || || | ||| | ||| || Sbjct 95841 ATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTT 95900 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || ||||| | |||||| |||||| Sbjct 95901 CCGGTTAGCGTTTTGACGAAAATTTGCATG 95930 >seq2953 Length=1164165 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 ||||||||||||| || || | |||||| ||| || | |||||| |||| ||| Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGA 120002 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | || |||||||||||||| || || || ||||| || ||| || ||||| | || Sbjct 120001 TCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTT 119942 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | ||||||| | || || |||| || | || ||||| || || ||||| | || Sbjct 119941 CGATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGA 119882 Query 132114 AAATCTGCATGAC 132126 ||||||||||||| Sbjct 119881 AAATCTGCATGAC 119869 >seq6989 Length=241196 Score = 86.0 bits (94), Expect = 6e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 147453 GTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCAC 147512 ||||| ||||||||| || | |||||| || || ||||||| | ||||| || Sbjct 5546 GTTCAAGGCGATAGATGCTAAATTGCACACAGCTACTTCTTCGGGACTGGAGTACTCGAC 5487 Query 147513 GATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCG 147572 || || | |||||| ||||||||||| || |||| || ||| ||||| ||| || Sbjct 5486 AATCTCTGTGCACAGATTGCTGCATTTGATCGTGCCCAGATGTTGATGATTCGATTTTCG 5427 Query 147573 ATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 147622 |||||| ||||| ||||||| || || || ||||| ||||||| Sbjct 5426 ATTGCAGTGATCTTTATAGAGCATATAAGGCGTTCCAGTCTCTACTTGCG 5377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476558218707480