Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq7387 95.1 4e-16 seq6230 95.1 4e-16 seq8382 89.7 2e-14 seq6666 89.7 2e-14 >seq7387 Length=359651 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 151052 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 151111 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 151112 CCGGGTTTCGGC 151123 >seq6230 Length=635097 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 495007 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 494948 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 494947 CCGGGTTTCGGC 494936 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||| |||||||| ||||||||||| | | Sbjct 494840 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAGGATCTAAATGTCCCTGGTTCGATC 494781 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 494780 CCGGGTTTCGGC 494769 >seq8382 Length=333293 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||| |||||| ||||| ||||||| | Sbjct 194191 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGGTCTAAATGTCCCCGGTTCAATC 194250 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 194251 CCGGGTTTCGGC 194262 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| |||||| || |||||||||||||||||| ||||| ||||||| | Sbjct 159716 GCCGAAATAGCTCAGGTGGGAGGGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 159775 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 159776 CCGGGTTTCGGC 159787 >seq6666 Length=236130 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| | | Sbjct 114640 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATC 114581 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 114580 CCGGGTTTCGGC 114569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848058353985