Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3349 125 6e-24 seq8719 95.1 1e-14 seq8311 86.0 6e-12 >seq3349 Length=644485 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | || || || |||||||| |||||| | ||||| |||||||||| || Sbjct 97301 CACCATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGC 97242 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||| || |||||| | || || ||| ||| ||||| || || || || ||||| Sbjct 97241 CTCCGACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGA 97182 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| | ||||| | || ||| || |||||||| || | | | | | |||||| Sbjct 97181 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTA 97122 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||| ||||| || ||||| ||| |||| || ||| Sbjct 97121 CAACATTCAGAAGGAATCTACCCTTCACTTGGTG 97088 Score = 113 bits (124), Expect = 4e-20 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| |||||||||| |||| ||| | || ||||| || Sbjct 95930 CATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTC 95871 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || |||||| | || || || ||| |||||||| || || || ||||| || Sbjct 95870 CGACACCATCGAGAATGTCAAGGCGAAGATTCAAGATAAAGAAGGAATTCCACCCGACCA 95811 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| ||||| || | || || ||||| ||||| |||| | | |||| | ||||| Sbjct 95810 GCAGAGACTGATCTTCGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTG--ATTAC 95753 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| || |||||||||||| | ||| | ||| Sbjct 95752 AATATCCAGAAAGAATCCACCCTCCATCTGGTG 95720 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || ||||| ||||| | |||||| | || || ||||| | Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || ||||| || ||||||||||| || ||||||||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 |||||| | || | | || |||||||| ||||| | | | |||| |||||||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTC--CGATTACA 94840 Query 25353 ATATTCAAAAAGAATCCACCATTCA 25377 | |||||||||||||| || |||| Sbjct 94839 ACATTCAAAAAGAATCTACGCTTCA 94815 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || ||||| ||||| | |||||| | || || ||||| | Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || ||||| || ||||||||||| || ||||||||| Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95126 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 |||||| | || | | || |||||||| ||||| | | | |||| ||||||| Sbjct 95125 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTC--TGATTACA 95068 Query 25353 ATATTCAAAAAGAATCCACCATTCA 25377 | || || |||||||||||| |||| Sbjct 95067 ACATCCAGAAAGAATCCACCCTTCA 95043 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || ||||| ||||| | |||||| | || || ||||| | Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || ||||| || ||||||||||| || ||||||||| Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95354 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 |||||| | || | | || |||||||| ||||| | | | |||| ||||||| Sbjct 95353 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTC--TGATTACA 95296 Query 25353 ATATTCAAAAAGAATCCACCATTCA 25377 | || || |||||||||||| |||| Sbjct 95295 ACATCCAGAAAGAATCCACCCTTCA 95271 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| |||||||||| |||| ||| | || ||||| || Sbjct 95702 CATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTC 95643 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || |||||| | || || || ||| || ||||| || || || |||||||| Sbjct 95642 CGACACCATCGAGAATGTCAAGGCGAAGATTCAAGACAAAGAAGGAATTCCACCCGATCA 95583 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGA-AATGTCAGCGATTAC 25351 ||| || || || | | || ||||| ||||| ||| || || |||| |||||| Sbjct 95582 GCAGAGGCTGATCTTTGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTC--TGATTAC 95525 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| || |||||||||||| | ||| | ||| Sbjct 95524 AATATCCAGAAAGAATCCACCCTCCATCTGGTG 95492 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || ||||| || || || ||||| | |||||| | |||||||| || Sbjct 96157 ATGCAAATCTTCGTAAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTCGAGGCTTCT 96098 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| || ||| || || || || || || || |||||| Sbjct 96097 GACACTATTGAAAATGTCAAAGCGAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 96038 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACAA 25353 || ||| | || | | ||| |||||||||||||||| | | | || | | || || || Sbjct 96037 CAGAGATTGATCTTTGCCGGAAAACAACTCGAAGATGGTCGCAC-GTTATCTGACTATAA 95979 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||| || |||||||||||| | ||| | ||| Sbjct 95978 TATCCAGAAAGAATCCACCCTCCATCTGGTG 95948 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || ||| | ||||| | ||||| || || | Sbjct 96613 ATGCAAATCTTCGTGAAGACTTTGACGGGGAAAACCATCACTTTGGAAGTTGAGGCTTCC 96554 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || ||| ||| ||||| || || || || ||||||||| Sbjct 96553 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 96494 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | ||||| | | || || ||||| ||||| | | | | | ||||||||| Sbjct 96493 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGACGGACGTACTTTGTCTGATTACAAT 96434 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || |||||||| ||| |||| || || Sbjct 96433 ATACAGAAAGAATCTACCCTTCACTTGGT 96405 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| | || |||||| |||| || | ||||| ||||| Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || || |||||| || ||||| || || || || |||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTACA 25352 || ||||| || | | || ||||| ||||| || | ||| | ||||| | |||| Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAG--ACTACA 96664 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||| || ||||| || | ||||| || Sbjct 96663 ATATTCAGAAGGAATCTACTCTGCATTTGGT 96633 >seq8719 Length=610 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261 ||||| | |||||| | || || ||||| ||| || |||||| | || || ||| Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 || || ||||||||||| || ||||||||||||||| | || | | || |||||| Sbjct 63 ATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAA 122 Query 25322 CTCGAAGATGATAGAA--ATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCA 25377 || ||||| | | | |||| ||||||||| |||||||||||||| || |||| Sbjct 123 CTAGAAGACGGACGCACCTTGTC--CGATTACAACATTCAAAAAGAATCTACGCTTCA 178 >seq8311 Length=725843 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 ||||||||| | ||||| || || | || || || | ||||| | || |||||||| Sbjct 132788 AACATGCAAATCTTTGTGAAGACTCTCACAGGCAAGACCATCACTCTTGAGGTCGAAGCT 132847 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 || || || || | ||||| || ||| ||||||||||| || || || ||| Sbjct 132848 TCTGACACAATAGAAAATGTAAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGAT 132907 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 |||||| | || || | | |||||| ||||| ||||| | |||| | | || || Sbjct 132908 CAGCAACGTCTGATCTTTGCCGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGACTAT 132967 Query 25352 AATATTCAAAAAGAATCCACCATTCAT 25378 ||||| || || || ||||| ||||| Sbjct 132968 AATATCCAGAAGGAGTCCACACTTCAT 132994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445044922193760