Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3349 114 1e-20 seq8719 89.7 5e-13 >seq3349 Length=644485 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||||||||||| |||||| || |||| || || || ||||||||||| Sbjct 94827 TCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAG 94886 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | ||||| || | ||| | | ||| ||||| ||| || ||| | | | Sbjct 94887 ATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTC 94946 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| | ||| ||||||| |||||| || || || || ||||| ||||| Sbjct 94947 TCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACG 95006 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 95007 AAGATCTGCAT 95017 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| |||| || || || |||| || ||||| |||||||||||| Sbjct 96195 TCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAAT 96254 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || |||||| || | || | | || ||||| ||||| |||| | | Sbjct 96255 ATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTC 96314 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || ||| | || ||||||| |||||| || || ||||||||||||||||| Sbjct 96315 TCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACG 96374 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 96375 AAAATCTGCAT 96385 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| ||||| ||||| ||||| || | ||| ||||| |||| || Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| ||||||||||| |||| | |||||| || | |||| || || |||| | || Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGT-CTTG 96751 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| | ||||| | | | | ||||| | |||||| |||| || |||||||| Sbjct 96752 AATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTT 96811 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || |||||||| Sbjct 96812 TCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || ||||||||||| | || ||| || |||| || || || ||||||||||| Sbjct 95055 TCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAG 95114 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | ||||| || | ||| | | ||| ||||| ||| || ||| | | | Sbjct 95115 ATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTC 95174 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| | ||| ||||||| |||||| || || || || ||||| ||||| Sbjct 95175 TCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACG 95234 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 95235 AAGATCTGCAT 95245 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || ||||||||||| | || ||| || |||| || || || ||||||||||| Sbjct 95283 TCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAG 95342 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | ||||| || | ||| | | ||| ||||| ||| || ||| | | | Sbjct 95343 ATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTC 95402 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| | ||| ||||||| |||||| || || || || ||||| ||||| Sbjct 95403 TCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACG 95462 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 95463 AAGATCTGCAT 95473 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| ||||| |||||||||||||||| ||| || || |||| || Sbjct 97088 CACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTC 97147 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | |||||||| || | || | | ||||| || Sbjct 97148 GAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTG 97207 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||||| | | | ||||||| | || || || | ||||| ||||| Sbjct 97208 AATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTT 97267 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || || ||||| || |||||||| Sbjct 97268 TCCCGTTAATGTCTTCACGAAAATCTGCAT 97297 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | || | ||||| || | ||| || || || || |||||||| | | Sbjct 96387 CCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGAC 96446 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || |||| || || ||||| || ||||| || | |||||||| || | || Sbjct 96447 AAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGG 96506 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || |||||| ||||| | | | ||||||| | || || Sbjct 96507 ATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACT 96566 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| ||||| ||||||||||| ||||| || || ||||| Sbjct 96567 TCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 >seq8719 Length=610 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||||||||||| |||||| || |||| || || || ||||||||||| Sbjct 166 TCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAG 107 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | ||||| || | ||| | | ||| ||||| ||| || ||| | | | Sbjct 106 ATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTC 47 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACC 35709 | | |||||| | ||| ||||||| |||||| || || || Sbjct 46 TCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450743488656440