Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3349 118 9e-22 seq6989 111 1e-19 seq8311 102 7e-17 seq2953 86.0 5e-12 >seq3349 Length=644485 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | ||| | |||||| || | ||||| ||||| || |||||||| || Sbjct 96385 TGCCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAG 96444 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || ||||||| || || || || || | ||||||||||| ||||| || | Sbjct 96445 ACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTG 96504 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || ||||| ||||| |||| | | || | ||||| | || |||| Sbjct 96505 GGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAA 96564 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| | ||| || | ||| ||||||| ||| ||||| |||||||||||| Sbjct 96565 CTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCATA 96614 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| || || | ||||| || || ||||| ||||||||| || |||| |||| || Sbjct 96176 TACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCGTCCTC 96235 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| || | ||||| | ||| ||||| ||||| | || ||||| || Sbjct 96236 GAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGGATTCCTTCTTTGTCTTG 96295 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| ||||| | || | || || | ||| || || || | || || | || Sbjct 96296 AATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGACCTCCAACGTGATGGTCTT 96355 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||||| ||||||||| || || ||||| Sbjct 96356 CCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || ||||| ||||| ||| || | || |||| ||| Sbjct 97089 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCG 97148 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || |||||| | ||||||||||| ||||| || || | || || ||||| Sbjct 97149 AGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGA 97208 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| | ||| || ||||| || || || | ||| Sbjct 97209 ATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTT 97268 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| | || ||||| || || ||||| Sbjct 97269 CCCGTTAATGTCTTCACGAAAATCTGCAT 97297 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||||||||| | ||||| || || |||||||||||||| || | || |||| || Sbjct 96632 TACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTC 96691 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| || | || || | ||| ||||| || || | || ||||| || Sbjct 96692 GAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTG 96751 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || || |||| | || | ||||||| ||||| ||||| | || || | ||| Sbjct 96752 AATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTT 96811 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| ||||| || || || |||||| Sbjct 96812 TCCAGTCAGGGTTTTGACGAAAATCTGCATA 96842 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 ||||||| || | | || | ||| | || | |||||| ||||||||||| ||||| | Sbjct 94786 TATTGCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAAT 94845 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 || || | |||| ||||||| || |||||||| || | || | | || ||||| | Sbjct 94846 CGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGG 94905 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | ||||||||| || ||| || || | | || | ||||| | |||| Sbjct 94906 GAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTT 94965 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || | || || | || || || | ||| ||||| ||||| |||||| Sbjct 94966 CAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95018 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| || || | ||| | |||| ||| | || || ||||| || ||||| ||||| | Sbjct 95929 TGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAG 95988 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | | || ||| | |||||||| ||||| ||||| | || | | ||| |||||||| Sbjct 95989 ATAACGT-GCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 96047 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | || || || || ||||| ||| | |||| | |||||| | || || Sbjct 96048 GGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCG 96107 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| | || || | || || |||| ||| || || |||||||||||| Sbjct 96108 ACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCATA 96158 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||||||| | || || |||||||| || || |||||| Sbjct 96843 CCACCGCGTAGACGAAGAACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGAT 96902 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| || ||||| || || | || | | |||||||||||| || Sbjct 96903 AACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGG 96962 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| ||||| || | |||| | |||||| | || ||||| Sbjct 96963 ATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACC 97022 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || ||||| | ||| ||||| ||||| |||||| Sbjct 97023 TCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACGAAGATCTGCATA 97070 >seq6989 Length=241196 Score = 111 bits (122), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 130781 ACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATT 130840 || ||||| ||||| || ||||| ||| ||| |||| ||| ||||||||||| || ||| Sbjct 6457 ACACGTCTTACGTAGATATTGCTGGTGTACGCCTCAATGGACTCGTTGTTGCCCAAAATT 6398 Query 130841 TGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTC 130900 || || || | ||||| ||||| ||| | || || || || | | ||||| || Sbjct 6397 TGCGCAGTCGACGCGGTTGGCATCGGTGCGATCAAGAGCGAGTTTCTCACTCCGTGTTTC 6338 Query 130901 GTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCAC 130960 | |||||| |||||| |||||||||||||||| | || || || ||| |||||| Sbjct 6337 GCGATTTTCGTCTTCAACTCATCCCAATCCCATAAATCCGTCGGCTTAACA---TTCCAC 6281 Query 130961 ATATCAAATTGTAGTAT 130977 || || |||| || || Sbjct 6280 ATGTCGTATTGCAGAAT 6264 >seq8311 Length=725843 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | |||| |||| ||| | || || || || || ||||| ||||| Sbjct 133017 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAA 132958 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| || || || ||||| | || ||||| || ||||| || || Sbjct 132957 AGAGTTCTGC-CGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAGG 132899 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| ||||| || | |||||| ||||| | ||||| || Sbjct 132898 AATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGAC 132839 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||||| || ||||| ||||||||||||||||| Sbjct 132838 CTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCAT 132791 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||| ||| | || || || || || || || ||||| Sbjct 133473 CCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAA 133414 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| | || || |||||| | || ||||| ||||||||||| || Sbjct 133413 AGAGTTCTGC-CGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAGG 133355 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| ||| || ||| | | |||| ||||| | |||||||| Sbjct 133354 AATTCCCTCTTTATCCTGGATTTTAGCTTTTACATTCTCTATTGTGTCAGATGCTTCAAC 133295 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || |||| || ||| | || || || ||||| Sbjct 133294 CTCAAGAGTGATGGTCTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 >seq2953 Length=1164165 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 |||||||||| || || || | | | || ||| | || || | |||||| |||||| | Sbjct 120061 CTTTTTGAATGTTATAATCAGATAAAGTA-CGCCCATCCTCTAACTGTTTGCCGGCGAAG 120003 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || ||||||||||| || || | |||||||| || ||||| ||||| || Sbjct 120002 ATCAGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTT 119943 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | ||||| || || || || || | || ||||| || |||||||| Sbjct 119942 TCGATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACG 119883 Query 27237 AAGATTTGCAT 27247 || || ||||| Sbjct 119882 AAAATCTGCAT 119872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424888344149016