Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6989 89.7 6e-13 >seq6989 Length=241196 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 78475 AGATCCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGG 78534 ||||| || | ||| ||| | || || ||||||||||| |||| || || | | | Sbjct 6505 AGATCTCGCAACAGATGCGGATTGATAATGACGAACTCTCCGGACAACACACGTCTTACG 6446 Query 78535 TAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAG 78594 ||||| ||| | ||||||| ||| | | ||||||||| |||| || || || ||||| Sbjct 6445 TAGATATTGCTGGTGTACGCCTCAATGGACTCGTTGTTGCCCAAAATTTGCGCAGTCGAC 6386 Query 78595 GCGGTCGGCATGGGTGCGACCA 78616 ||||| ||||| ||||||| || Sbjct 6385 GCGGTTGGCATCGGTGCGATCA 6364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548463824611920