Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq8311 136 3e-27 seq3349 131 1e-25 seq5300 118 9e-22 seq2953 116 3e-21 seq8719 96.9 3e-15 seq4549 84.2 2e-11 >seq8311 Length=725843 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || ||| | || |||||||| || ||| |||| Sbjct 133475 ATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTCT 133534 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || |||||| |||||||||||||| || || || ||||| Sbjct 133535 GACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCAG 133594 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| ||| | ||||| | || |||| || || ||| Sbjct 133595 CAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAAC 133654 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | ||| ||||| ||||| | || || || || Sbjct 133655 ATCCAGAAAGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGAAT 133704 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||| ||| || | || ||| | || |||||||| || ||| | || Sbjct 133247 ATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATCT 133306 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| ||||| || || ||||| || || || || |||||| Sbjct 133307 GACACAATAGAGAATGTAAAAGCTAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAA 133366 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| || ||||| |||||| | || |||| || || ||| Sbjct 133367 CAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAAC 133426 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| ||||||||||| | || || || || Sbjct 133427 ATCCAGAAGGAGTCCACACTTCATCTGGTTTTGCGTCTTCGAGGAGGAAT 133476 >seq3349 Length=644485 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || | || || || | || || || ||||| || | | Sbjct 97299 CCATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCT 97240 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| |||| |||| || || ||| |||||||| || ||||| || |||||||||| Sbjct 97239 CCGACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATC 97180 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | |||||| | || | |||||| || ||| | || ||| | || | |||||||||| Sbjct 97179 AGCAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACA 97120 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||| ||||| || ||| | || ||||| | || | || ||||| || Sbjct 97119 ACATTCAGAAGGAATCTACCCTTCACTTGGTGCTTCGACTTCGAGGTGGTAT 97068 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| ||||| || || | ||||| | ||||||||| | || Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||||||||||||||||||||||| ||||| ||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||| | | || | || || ||||| | || ||| | ||| | || || || ||||| Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGAC-GGACGAACTTTGTCAGACTACAA 96663 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| ||||| || || | |||||||| Sbjct 96662 TATTCAGAAGGAATCTACTCTGCATTTGGT 96633 Score = 113 bits (124), Expect = 4e-20 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| | || || ||| | || || | || || ||| | ||| Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||||||||| || || || |||||||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || |||||| | |||||| | ||| | |||||||||||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAAC 94838 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC-ATAACAAACAC 27226 |||||||| || || || | || | || | ||| | | |||||| ||| | ||| Sbjct 94837 ATTCAAAAAGAATCTACGCTTCACCTTGTACTTCGTCTCAGAGGTGGCAATATCTAACTA 94778 Query 27227 TTTTGTAATATG 27238 ||| || |||| Sbjct 94777 TTTATTACTATG 94766 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || || | || ||| | ||||| || | ||| Sbjct 96613 ATGCAAATCTTCGTGAAGACTTTGACGGGGAAAACCATCACTTTGGAAGTTGAGGCTTCC 96554 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || ||| |||||||| || ||||| || ||||||||||| Sbjct 96553 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 96494 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||| | |||||| | || | || |||||||| Sbjct 96493 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGACGGACGTACTTTGTCTGATTACAAT 96434 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || ||||| | || | || |||||||| Sbjct 96433 ATACAGAAAGAATCTACCCTTCACTTGGTACTTCGGCTTCGAGGTGGCAT 96384 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| || ||||| ||| | ||||| | || || || | || Sbjct 95702 CATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTC 95643 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct 95642 CGACACCATCGAGAATGTCAAGGCGAAGATTCAAGACAAAGAAGGAATTCCACCCGATCA 95583 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || ||||| | || || | |||| | || |||||||| Sbjct 95582 GCAGAGGCTGATCTTTGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTGATTACAA 95523 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | ||| |||| | || | || ||||| || Sbjct 95522 TATCCAGAAAGAATCCACCCTCCATCTGGTGCTTCGACTTCGAGGTGGTAT 95472 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || |||||| |||| || ||| | || || | || || || | || Sbjct 96386 CATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTC 96327 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || ||| || ||||||||||||||||| || || || ||||| Sbjct 96326 CGATACCATCGAGAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAATCCCGCCTGATCA 96267 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | |||| || || ||||| | || ||| | || | ||||| ||||| Sbjct 96266 GCAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAA 96207 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || ||| | || || || | || | || ||||| || Sbjct 96206 CATTCAGAAGGAATCTACCCTTCACTTAGTACTTCGACTTCGAGGTGGTAT 96156 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| | || || ||| | || || | || || ||| | ||| Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||||||||| || || || |||||||| Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95126 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || |||||| | |||||| | ||| | || ||||||||| Sbjct 95125 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95066 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || |||| | || | || ||||| || Sbjct 95065 ATCCAGAAAGAATCCACCCTTCACCTGGTGCTTCGACTTCGAGGTGGTAT 95016 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| | || || ||| | || || | || || ||| | ||| Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||||||||| || || || |||||||| Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95354 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || |||||| | |||||| | ||| | || ||||||||| Sbjct 95353 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95294 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || |||| | || | || ||||| || Sbjct 95293 ATCCAGAAAGAATCCACCCTTCACCTGGTACTTCGACTTCGAGGTGGTAT 95244 >seq5300 Length=1069934 Score = 118 bits (130), Expect = 9e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| |||| || || ||||| ||| | || Sbjct 717746 ATGCAGATTTTTGTGAAGACTCTCACGGGTAAGACTATAACCCTCGAAGTAGAAGCCTCT 717805 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||| | || || ||||||||||| || ||||| || ||||| ||||| Sbjct 717806 GACTCCATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAAGGAATTCCACCTGATCAG 717865 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | || ||||||||||||||||| | || |||| || || ||| Sbjct 717866 CAACGACTTATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCTGACTATAAC 717925 Query 27168 ATTCAAAA 27175 || ||||| Sbjct 717926 ATCCAAAA 717933 >seq2953 Length=1164165 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || ||||| || || || ||| | ||||| || || || ||| | Sbjct 119868 CGTCATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTCGAGGTAGAAGC 119927 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||||| | || || | || ||| || |||||||||||||| || || ||||| || Sbjct 119928 ATCCGATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGGATTCCACCAGA 119987 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||||||||| | || | |||||||||||| || || || | || | || ||||| Sbjct 119988 TCAACAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTACTTTATCTGATTA 120047 Query 27164 CAACATTCAAAA 27175 ||||||||||| Sbjct 120048 TAACATTCAAAA 120059 >seq8719 Length=610 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/225 (70%), Gaps = 1/225 (0%) Strand=Plus/Plus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 || ||| | || || | || || ||| | |||||| | || |||| || || ||| Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 || ||||||||||| || || || |||||||| || | ||||| | || || |||||| Sbjct 63 ATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAA 122 Query 27135 TTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTG 27194 | |||||| | ||| | |||||||||||||||||||| || || || | || | Sbjct 123 CTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCACCTT 182 Query 27195 GTTTTGCGTTTGCGGGGTGGC-ATAACAAACACTTTTGTAATATG 27238 || | ||| | | |||||| ||| | ||| ||| || |||| Sbjct 183 GTACTTCGTCTCAGAGGTGGCAATATCTAACTATTTATTACTATG 227 >seq4549 Length=1308415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 ||| || ||||| |||||||| | | || | ||| || |||||| ||||||| | Sbjct 663400 AGGAATTCCACCAGATCAACAAAGACTGATCTTCGCTGGAAAACAACTGGAAGATGGGAG 663341 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208 || | || || || ||||||||||| ||||| || |||||||| || ||||| ||||| Sbjct 663340 AACTTTATCTGACTATAACATTCAAAAAGAGTCTACTTTACATTTAGTGTTGCGCTTGCG 663281 Query 27209 GGGTGG 27214 ||||| Sbjct 663280 AGGTGG 663275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434870053383360