Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq8719 91.5 1e-13 seq3349 91.5 1e-13 >seq8719 Length=610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| ||| | || || |||||| | ||||| ||||| || |||||| | || Sbjct 69 GACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAACTAGAA 128 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA 27980 |||| ||||| |||||||||||||||||| |||||||| Sbjct 129 GACGGACGCACCTTGTCCGATTACAACATTCAAAAAGA 166 >seq3349 Length=644485 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| ||| | || || |||||| | ||||| ||||| || |||||| | || Sbjct 94924 GACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAACTAGAA 94865 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA 27980 |||| ||||| |||||||||||||||||| |||||||| Sbjct 94864 GACGGACGCACCTTGTCCGATTACAACATTCAAAAAGA 94827 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| ||| | || || |||||| | ||||| ||||| || |||||| | || Sbjct 95152 GACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAACTAGAA 95093 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA 27980 |||| ||||| | |||| |||||||||||||| ||||| Sbjct 95092 GACGGACGCACCCTGTCTGATTACAACATCCAGAAAGA 95055 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| ||| | || || |||||| | ||||| ||||| || |||||| | || Sbjct 95380 GACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAACTAGAA 95321 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA 27980 |||| ||||| | |||| |||||||||||||| ||||| Sbjct 95320 GACGGACGCACCCTGTCTGATTACAACATCCAGAAAGA 95283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355823830409811