Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3349 95.1 1e-14 >seq3349 Length=644485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || ||| |||| | || | ||||| ||| || ||| ||||| | Sbjct 95688 ACGAAAATTTG--CATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCT 95745 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | ||||| ||||| | || || ||| | || || |||||||| ||||| || || || | Sbjct 95746 GGATATTGTAATCAGACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTC 95805 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCG 39220 ||||||||||| || | | ||||| || || ||| |||| || | | | Sbjct 95806 TCTGCTGGTCGGGTGGAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGG 95865 Query 39221 TATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTT 39280 | ||| | ||| || |||| ||| || | ||||| || |||||||| || || |||| Sbjct 95866 TGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTT 95925 Query 39281 GCAT 39284 |||| Sbjct 95926 GCAT 95929 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||||| |||||||| ||||| | | || ||| |||| ||| Sbjct 96405 ACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGACAAAGTACGTCCGTCTTCA 96464 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 || || || || ||||| || ||||||||||| || |||||| | || || || | | | Sbjct 96465 AGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCT-TCCTTAT-CTT 96522 Query 39195 GATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || | | || || | || | | ||| ||| | ||| || |||| ||||| ||| Sbjct 96523 GAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTT 96582 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||||| || || || ||||||||||| Sbjct 96583 TCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429499044371309