Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8311 141 6e-29 seq3349 116 3e-21 seq2953 113 3e-20 seq5300 100 2e-16 seq8719 98.7 7e-16 seq4549 89.7 3e-13 >seq8311 Length=725843 Score = 141 bits (156), Expect = 6e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| |||||||||||||| || || |||||||| || ||||| | | Sbjct 133702 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133761 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | ||||| |||||| |||||||| || | || || ||||| Sbjct 133762 TGACACAATAGAGAATGTAAAAGCCAAAATTCAGGACAAAGAGGGAATTCCTCCGGATCA 133821 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || ||||| ||||| || ||||||| | | ||| || || ||||| Sbjct 133822 GCAACGTTTGATCTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACTCTATCGGACTACAA 133881 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | |||||||| ||| | | || ||||| Sbjct 133882 CATCCAGAAGGAGTCCACGCTGCATTTAGTCTTACGACTTCGCGGAGG 133929 Score = 134 bits (148), Expect = 9e-27 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| |||||||||||||| || || |||||||| || ||||| | | Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | |||| |||||| |||||||||||| | || || ||||| Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || | || || |||||||| ||||| ||||| | | ||| | || || || Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || |||||||||||| | ||| | ||| | | | ||||||||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGA 133702 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| | ||||||| |||| || || |||||||| || ||||| | | Sbjct 133246 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133305 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | ||||| ||||| || ||||| || | || || ||||| Sbjct 133306 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCA 133365 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || ||||| || ||| | ||||||| | ||| | || || || Sbjct 133366 ACAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133425 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || ||||||||| | ||| | ||||| | | ||||||||| Sbjct 133426 CATCCAGAAGGAGTCCACACTTCATCTGGTTTTGCGTCTTCGAGGAGGA 133474 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| | ||||||| |||| || || |||||||| || ||||| | | Sbjct 133018 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133077 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | ||||| ||||| |||||||| || | || || ||||| Sbjct 133078 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 133137 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || ||||| || ||| | ||||||| | ||| | || || || Sbjct 133138 GCAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133197 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || ||||||||| | ||| | ||| | | | ||||||||| Sbjct 133198 TATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGA 133246 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || || || || || ||||| || || || |||||||| || || || | Sbjct 132788 AACATGCAAATCTTTGTGAAGACTCTCACAGGCAAGACCATCACTCTTGAGGTCGAAGCT 132847 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | |||| |||| || ||| || ||||| || | || |||||| Sbjct 132848 TCTGACACAATAGAAAATGTAAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGAT 132907 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || ||| | || ||||||||||| ||||||||||||| | ||| | || || Sbjct 132908 CAGCAACGTCTGATCTTTGCCGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGACTAT 132967 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || ||||||||| | ||| | ||| | | | ||||||||| Sbjct 132968 AATATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGA 133018 >seq3349 Length=644485 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || ||||| || ||||| | || ||||| | | Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | |||| | |||||||| ||| | || || ||||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAA-TCCAAGACAAAGAGGGTATCCCTCCCGATCA 94899 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | ||||| ||||| || |||||||| ||||||| |||||| || ||||||||| Sbjct 94898 GCAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAA 94839 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||| || || Sbjct 94838 CATTCAAAAAGAATCTAC 94821 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | ||||||||||| ||||| |||||||| || || | Sbjct 97297 ATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCC 97238 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| ||| || || ||||| | || || ||||| Sbjct 97237 GACACGATCGAGAACGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCAG 97178 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| || ||||| || |||| ||| ||||| |||||||||| Sbjct 97177 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACAAC 97118 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 97117 ATTCAGAAGGAATCTAC 97101 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||| || ||||||||||| || | ||||| || | | Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | |||| || ||||||||||| | || || ||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAA-TTCAAGACAAAGAAGGCATTCCACCTGATCA 96723 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || || |||| ||| ||||| || ||||| Sbjct 96722 GCAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCAGACTACAA 96663 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || || || || | ||||| || Sbjct 96662 TATTCAGAAGGAATCTACTCTGCATTTGGT 96633 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || ||||| || ||||| | || ||||| | | Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | |||| | |||||||| ||| | || || ||||| Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAA-TCCAAGACAAAGAGGGTATCCCTCCCGATCA 95127 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | ||||| ||||| || |||||||| ||||||| |||||| | |||||||| Sbjct 95126 GCAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAA 95067 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||| ||||| Sbjct 95066 CATCCAGAAAGAATCCAC 95049 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || ||||| || ||||| | || ||||| | | Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | |||| | |||||||| ||| | || || ||||| Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAA-TCCAAGACAAAGAGGGTATCCCTCCCGATCA 95355 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | ||||| ||||| || |||||||| ||||||| |||||| | |||||||| Sbjct 95354 GCAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAA 95295 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||| ||||| Sbjct 95294 CATCCAGAAAGAATCCAC 95277 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| | ||||| || || ||||| | || || || || | Sbjct 96385 ATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCC 96326 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | ||| | || | || ||||||||||| | ||||| ||||| Sbjct 96325 GATACCATCGAGAATGTGAAAGCTAAGA-TTCAAGACAAAGAAGGAATCCCGCCTGATCA 96267 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | |||||||| || ||||| || || |||| ||||||| | ||| ||||| Sbjct 96266 GCAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAA 96207 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || || || | || ||||| Sbjct 96206 CATTCAGAAGGAATCTACCCTTCACTTAGT 96177 >seq2953 Length=1164165 Score = 113 bits (124), Expect = 3e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||||||||| || || || || ||||| || || | | Sbjct 119872 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTCGAGGTAGAAGCATCC 119931 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | ||| || ||| |||||||| || | || ||||||||| Sbjct 119932 GATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGGATTCCACCAGATCAA 119991 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||||||||| | || || | || |||||| ||||| ||| Sbjct 119992 CAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTACTTTATCTGATTATAAC 120051 Query 23791 ATACAAAAAG 23800 || ||||||| Sbjct 120052 ATTCAAAAAG 120061 >seq5300 Length=1069934 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || |||||||| || || || || |||||||| || || | Sbjct 717746 ATGCAGATTTTTGTGAAGACTCTCACGGGTAAGACTATAACCCTCGAAGTAGAAGCCTCT 717805 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | |||||| | || |||||| || || ||||| | || || ||||| Sbjct 717806 GACTCCATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAAGGAATTCCACCTGATCAG 717865 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || ||||| ||||||||| ||||||| | ||| ||| | || || ||| Sbjct 717866 CAACGACTTATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCTGACTATAAC 717925 Query 23791 ATACAAAAAG 23800 || ||||||| Sbjct 717926 ATCCAAAAAG 717935 >seq8719 Length=610 Score = 98.7 bits (108), Expect = 7e-16 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 23638 GGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAA 23696 ||||| || ||||| | || ||||| | | ||||| | || ||| |||| | ||| Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 23697 AATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACA 23756 | | |||||||| ||| | || || ||||| || | ||||| ||||| || ||||| Sbjct 63 A-TCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACA 121 Query 23757 ACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 ||| ||||||| |||||| || |||||||||||| |||||||| || || Sbjct 122 ACTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTAC 172 >seq4549 Length=1308415 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778 || ||||||||||| | | || || || || |||||||||||||| | | |||||| Sbjct 663393 CCACCAGATCAACAAAGACTGATCTTCGCTGGAAAACAACTGGAAGATGGGAGAACTTTA 663334 Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| ||||||||||| || ||||||||||| || | |||||||| || Sbjct 663333 TCTGACTATAACATTCAAAAAGAGTCTACTTTACATTTAGTGTTGCGCTTGCGAGGTGG 663275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337972965357644