Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3349 156 1e-32 seq8311 152 1e-31 seq8719 140 8e-28 seq5300 109 1e-18 seq8013 102 2e-16 seq4549 86.0 1e-11 >seq3349 Length=644485 Score = 156 bits (172), Expect = 1e-32 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || || ||||| ||||||||||| |||| ||||||||| | || || Sbjct 95709 CGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTC 95768 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || |||||||| |||| || |||||||| ||||| ||| Sbjct 95769 CGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTCCT 95828 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || ||||| ||||| ||| ||| ||||||||||| || | || || || ||| Sbjct 95829 TCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAAC 95888 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||||| | ||| | |||||| Sbjct 95889 GTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || ||||||||||| | |||||||||| ||| || | || ||| Sbjct 94806 AGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCT 94865 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||| || || || || ||||| | || ||| || ||||| || ||||| || |||||| Sbjct 94866 TCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCT 94925 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| ||| ||||||||||| || | ||| || || |||||||| ||| Sbjct 94926 TGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTC 94985 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || | ||| | ||||| Sbjct 94986 TTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || || ||||| || ||||||||||| |||| |||||||| | || || Sbjct 95025 CGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTG 95084 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || |||||||| || || || || ||||| | || ||| || ||||| || ||||| Sbjct 95085 CGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCC 95144 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||||||||| || ||| ||| ||||||||||| || | ||| || || ||| Sbjct 95145 TCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAAC 95204 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || ||||| || | ||| | ||||| Sbjct 95205 GTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || || ||||| || ||||||||||| |||| |||||||| | || || Sbjct 95253 CGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTG 95312 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || |||||||| || || || || ||||| | || ||| || ||||| || ||||| Sbjct 95313 CGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCC 95372 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||||||||| || ||| ||| ||||||||||| || | ||| || || ||| Sbjct 95373 TCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAAC 95432 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || ||||| || | ||| | ||||| Sbjct 95433 GTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || || || ||||| ||||||||||| |||| ||||||||| | || || Sbjct 95481 CGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTC 95540 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || || ||||| || | || || ||||| ||||| ||| Sbjct 95541 CGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCT 95600 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||| ||||| ||| ||| ||||||||||| || | || || || ||| Sbjct 95601 TCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAAC 95660 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||||| | ||| | |||||| Sbjct 95661 GTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | ||| || || |||||||| || | ||||||||| | |||||| Sbjct 96393 CGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGACAAAGTA 96452 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| || ||||| ||||| ||||| || || || || ||||| || || ||| Sbjct 96453 CGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCT 96512 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| ||||| |||||| |||||| ||||| ||||| || | || || || || Sbjct 96513 TCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAA 96572 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || ||||||||||| || | ||| | |||||| Sbjct 96573 GTGATGGTTTTCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || ||||| ||||| || || | |||||| || | |||||| Sbjct 96620 ACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGT 96679 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || ||||| || || || ||||| |||| || || || || ||||| || Sbjct 96680 TCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCC 96739 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||| || || ||||||| || ||||||||||| | |||||| || || Sbjct 96740 TTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAA 96799 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || || |||| ||||| | ||| | ||||| Sbjct 96800 GGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || || ||||| ||||||||||| |||| ||| || || | || || Sbjct 95937 CGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGATAACGTG 95996 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || || || || || ||||| | || || || || || || || ||| Sbjct 95997 CGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATTCCT 96056 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| || ||| ||| || ||||| || | || || || ||| Sbjct 96057 TCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACTTCCAAC 96116 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||||||| |||| ||| | |||||| Sbjct 96117 GTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || || | ||| || || ||||| || || | ||||| |||| || ||| Sbjct 96165 CGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAGAGTG 96224 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || ||||| || || || || || || | || || || ||||| || ||| Sbjct 96225 CGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGGATTCCT 96284 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||| ||||| |||||| |||||||| || |||| || || || ||| Sbjct 96285 TCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGGCCTCGACCTCCAAC 96344 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| |||||||||||||| | ||| | ||||| Sbjct 96345 GTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| ||||||||||||| || || |||| || || | |||||||| || || Sbjct 96867 TGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGATAACGTGCGACCATCTTCAAGTTGT 96926 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| | || ||||| || || || || |||||||| || || ||||| Sbjct 96927 TTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCTGAATCTTC 96986 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| ||| || ||||| || | || || || |||||||| ||||| ||||| Sbjct 96987 GCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTCTTCCCCGTT 97046 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| | ||||| Sbjct 97047 AAAGTCTTCACGAAGATCTGCAT 97069 >seq8311 Length=725843 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||| || || || || ||||| ||||| |||| || || || | | |||| Sbjct 133695 CGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTT 133636 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| ||||| || |||||||| || ||||| || || || ||||||||| Sbjct 133635 CTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGGAATACCT 133576 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||| || ||| ||| ||| || || ||||| || | ||| || || | Sbjct 133575 TCTTTGTCTTGTATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAACCTCAAGA 133516 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| ||||| | ||||||| ||| | |||||| Sbjct 133515 GTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCATT 133474 >seq8719 Length=610 Score = 140 bits (154), Expect = 8e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || ||||||||||| | |||||||||| ||| || | || ||| Sbjct 187 AGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCT 128 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||| || || || || ||||| | || ||| || ||||| || ||||| || |||||| Sbjct 127 TCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCT 68 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| ||| ||||||||||| || | ||| || || |||||||| ||| Sbjct 67 TGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTC 8 Query 225682 TTGCC 225686 || || Sbjct 7 TTTCC 3 >seq5300 Length=1069934 Score = 109 bits (120), Expect = 1e-18 Identities = 129/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||||| || || || | | ||| | |||||||| | || || ||||| || | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 |||||||||| || || || ||||| |||||||| ||||| || || ||||||| || Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTT 717816 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 | |||| ||| |||| ||| || || | || || ||||| ||||| | ||| || Sbjct 717815 CAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTT 717761 >seq8013 Length=18478 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||||||||||||||| |||| ||||||||| | |||||||| ||||| || || Sbjct 7532 TTCTGGATGACCAAAAAATCAAAATAGATGTTGATATAAAATAGGATCCCCTCCTCCGGA 7473 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||||||||| ||||| || || | ||||||||| Sbjct 7472 TGGATCAAAAAAAGATGTATTTAAGTTCCGATCAGTTAA 7434 Score = 96.9 bits (106), Expect = 8e-15 Identities = 165/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 7494 TATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCA 7553 ||| ||||| | |||||||||| || || | ||||| ||| | |||| || Sbjct 6908 TATAATTATTCGATTAGAATTAG--GCACCTGTAACTCAATGATTTA----TAATGATCA 6961 Query 7554 ACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC 7613 | |||| ||| | || || |||||| ||| |||| ||||| ||| | || || || Sbjct 6962 AATTTATAACACATTAATCACAAGGCATGCATTTATTATAATTTTTTTTATAGTAATACC 7021 Query 7614 GGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATAT 7673 |||| || || || || ||||||| | ||||||||||| | || |||||||||| Sbjct 7022 ATTTATAATTGGTGGATTTGGAAATTATCTTGTTCCTTTAATATTAGGCTCTCCTGATAT 7081 Query 7674 GGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || | ||| | | || |||||||| |||||| | |||| ||||| ||| || || Sbjct 7082 AGCCTATCCTCGAATAAATAATATAAGATTTTGACTTTTACCACCTTCATTAATTTTA 7139 >seq4549 Length=1308415 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| || |||||||| | || || || | ||||||||||||||||| || || || || Sbjct 663304 AGTAGACTCTTTTTGAATGTTATAGTCAGATAAAGTTCTCCCATCTTCCAGTTGTTTTCC 663363 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 ||||||||| |||| |||||| || || ||||| ||| Sbjct 663364 AGCGAAGATCAGTCTTTGTTGATCTGGTGGAATTCCT 663400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192395321131742