Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7280 107 1e-18 >seq7280 Length=1514598 Score = 107 bits (118), Expect = 1e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| ||| |||| ||||||||||| || || || ||||| | || Sbjct 1012393 CATATCTTTGTATTCTGCACCGTAATGTCTCCATTGGAATCCATAGACAGGTCCTAAATC 1012334 Query 27549 TCCCTCTTCCCTGT-GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 || || || |||| ||| ||||| | |||||||| | | ||||| || | Sbjct 1012333 ACCTTCCTCTCTGTCGCT-AAAGCCACAGGAATCCAAAAAAGCACGCGAACCATTTTTAT 1012275 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 ||||||| | || || || || | | ||||| || ||||| || ||| ||| ||||| Sbjct 1012274 CCCAGATGTGTATACCTTTATCTGCTAATTCTTTAGAATTTGTTGATCCTTTGATGAACC 1012215 Query 27668 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGT 27713 | | || ||| || || || || |||||||| || |||||||| || Sbjct 1012214 ATAACAACTCTTCAACCACTGCTTTCCAAAATACTCTCTTGGTTGT 1012169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369467151539483