Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6989 93.3 6e-14 seq8630 89.7 7e-13 seq3742 89.7 7e-13 >seq6989 Length=241196 Score = 93.3 bits (102), Expect = 6e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 77664 ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA 77723 || ||||||||||| || |||||||||| ||| || || ||||| || | | ||| Sbjct 5554 ACGAACATGTTCAAGGCGATAGATGCTAAATTGCACACAGCTACTTCTTCGGGACTGGAG 5495 Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 || | | ||||| || || ||||| || |||||||| |||||||||| ||| || || Sbjct 5494 TACTCGACAATCTCTGTGCACAGATTGCTGCATTTGATCGTGCCCAGATGTTGATGATTC 5435 Query 77784 CTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 ||| |||||| ||| || ||||| || ||| | || || || || || | || || Sbjct 5434 GATTTTCGATTGCAGTGA-TCTTTATAGAGCATATAAGGCGTTCCAGTCTCTACTTGCGA 5376 Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTA 77877 || ||||| ||| || |||| |||| || Sbjct 5375 CCTGAGAATAGTGACCCACACATCTCTGGCTTGTA 5341 >seq8630 Length=35068 Score = 89.7 bits (98), Expect = 7e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 |||||||||||| ||||| || || ||||| || || || || || ||||| | ||| || Sbjct 13722 ATACATTTCGGAATGAATGTTCTCTATTGCAATTTGGAAGCCATAGAAACAACGCGCCTC 13663 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 || |||| || || || |||| |||| | ||| ||||| || || || ||| Sbjct 13662 TGAAATCTTAACTTCTTGGCAGAATCTTTCAATAAGATTTTCATTGACGATACCGTCAGA 13603 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT 48607 ||| ||||| || || || || || || |||||| |||| | |||| ||| ||| Sbjct 13602 AGCGGCAAAGAACGCCAACACGTGGGATATGAAATATCTTTCATCGGAATTCAATTT 13546 >seq3742 Length=701801 Score = 89.7 bits (98), Expect = 7e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||||||||| ||||| |||||| |||||||| || |||| ||| |||||||| Sbjct 290093 TTCAAATTCATCACCCCAGACATCAATTAATCCAGGACACTCATGTGGACACATCAAACT 290034 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| ||| |||| || ||| ||| |||||| | ||| ||| |||||| ||| ||| Sbjct 290033 CCAATCAGCATCATCAAAAACACGTCGCATAAATATATCTGGTGTCCATAATGCATAAAA 289974 Query 78044 TAGATCT 78050 | |||| Sbjct 289973 CATATCT 289967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694591578879520