Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8311 138 8e-28 seq3349 132 3e-26 seq8719 98.7 7e-16 seq2953 95.1 9e-15 >seq8311 Length=725843 Score = 138 bits (152), Expect = 8e-28 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| |||| || | || ||||| ||||| ||| |||||| ||||| || || || Sbjct 133021 CATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTC 132962 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| || |||| ||||| ||||| ||||||||||||| ||| ||||||||| Sbjct 132961 AGAAAGAGTTCT-GC-CGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCT 132904 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | || || || ||| ||||| ||| | || |||| ||||| | | | Sbjct 132903 GGAGGAATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCT 132844 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| | || || ||||| || ||||| |||||||| |||||||||||| Sbjct 132843 TCGACCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATG 132790 Score = 113 bits (124), Expect = 3e-20 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| |||| || | || ||||| ||||| ||| ||| || |||||||| || || Sbjct 133705 CATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTC 133646 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| || | || || || ||||| ||||| ||||||| || |||||||| Sbjct 133645 AGAAAGAGTTCT-GC-CATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCA 133588 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | ||| | |||||| || || ||| || ||| | | ||| |||| ||||| | | Sbjct 133587 GGAGGAATACCTTCTTTGTCTTGTATTTT-TGCCTTTACATTCTCTATTGTGTCAGACGC 133529 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | || || ||||| ||||||||||| || ||||| || ||||| Sbjct 133528 TTCAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Score = 111 bits (122), Expect = 1e-19 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 44135 TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCT 44192 || |||||| |||||| ||||||||||| || | ||||| || | || |||| || Sbjct 133905 TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGATAGAGTTCT-GC-CATCTTCCAACT 133848 Query 44193 GCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCT 44252 |||| || |||||||||||||| |||||||| | ||| | || || || ||| | | | Sbjct 133847 GCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGAATTCCCTCTTTGTCC-TGAATT 133789 Query 44253 TCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 | |||| | ||| |||| ||||| | | ||| ||||| | || || ||||| ||| Sbjct 133788 TTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCTTACCC 133729 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || ||||| || ||||| Sbjct 133728 GTGAGGGTTTTTACGAAAATCTGCAT 133703 >seq3349 Length=644485 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||| | |||||||||||| ||| || || |||||||||||||| Sbjct 95015 CATACCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATC 95074 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| || || || || || |||||||| || | |||||||| | Sbjct 95075 AGACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGG 95134 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | ||| || || || || ||| || | || ||| | |||||||||| | || Sbjct 95135 AGGGATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTT 95193 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||| || |||||||| || | |||||||||||||| ||||| Sbjct 95194 CAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||| | ||||||||||| ||| || || |||||||||||||| Sbjct 95243 CATACCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATC 95302 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| || || || || || |||||||| || | |||||||| | Sbjct 95303 AGACAGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGG 95362 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | ||| || || || || ||| || | || ||| | |||||||||| | || Sbjct 95363 AGGGATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTT 95421 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||| || |||||||| || | |||||||||||||| ||||| Sbjct 95422 CAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||| || | | || ||||||||||| || ||||| ||||||||||||| | Sbjct 94791 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 94850 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | ||| |||| || || || || || |||||||| || | |||||||| | ||| Sbjct 94851 AAGGT-GCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 94909 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | ||| || || || || ||| || | || ||| | |||||||||| | ||| | Sbjct 94910 GATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 94968 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| ||| || |||||||| || | |||||||||||||| ||||| Sbjct 94969 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95017 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||| | |||||| || || ||| || || ||||| |||||||| Sbjct 95471 CATACCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATC 95530 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || ||||| || || |||||||||| | ||||||||| | Sbjct 95531 AGACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGG 95590 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || |||||| ||| | | | |||||||||| | || Sbjct 95591 TGGAATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTC 95650 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| ||||||||||||||| || || || || ||||| ||||||||| Sbjct 95651 GACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95702 Score = 116 bits (128), Expect = 3e-21 Identities = 169/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||| | ||||| |||||| || ||||| || ||||||||||| Sbjct 97067 CATACCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATC 97126 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | || |||| || || ||||| ||||| ||||| | |||||||||||| | Sbjct 97127 GGACAAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGG 97186 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| ||| | | |||| | || ||||||| || | Sbjct 97187 TGGGATCCCTTCCTTATCTTGAATCTT-TGCCTTCACGTTCTCGATCGTGTCGGAGGCCT 97245 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || || | || || || |||||||| | ||||||||||| || |||||| || Sbjct 97246 CGACTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATGGTG 97301 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || ||||||||||| || |||| | ||| | || || || || || || |||||| Sbjct 96879 TCTTTTTGGATGTTATAGTCGGATAACGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAG 96938 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| | ||| ||||| | || | |||||||| ||| |||||| ||| | || Sbjct 96939 ATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCTGAATCTTCGCCTTGACATTT 96998 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||||| | || ||||||| ||| || ||||| ||||| | ||||||||| Sbjct 96999 TCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTCTTCCCCGTTAAAGTCTTCACG 97058 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 97059 AAGATCTGCAT 97069 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || | | |||||| || || ||| || || ||||| ||||| Sbjct 95696 TTGCATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTA 95755 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || ||||| || || || ||||||| | |||||| || Sbjct 95756 ATCAGACAGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTC 95815 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||||| || || |||||| ||| | | | |||||||||| | Sbjct 95816 GGGTGGAATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGC 95875 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||| ||||||||||||||| || || || || ||||| ||||||||| Sbjct 95876 CTCGACCTCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATG 95930 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || | | |||||| || || ||| || || ||||| || || Sbjct 95924 TTGCATGCCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATA 95983 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | ||| | || || || || || |||||||||||||| | ||||||||| Sbjct 95984 GTCAGATAACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATC 96043 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | |||||||| ||| |||||| || | || | || ||||| | | Sbjct 96044 CGGGGGGATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGC 96103 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||| || |||||||| || | ||||| |||||||||||||| Sbjct 96104 CTCGACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || || || || || |||||||| | | || |||| || Sbjct 96405 ACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGACAAAGTACGTCCGTCTTCA 96464 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | |||||||||||| | || | |||||||| || Sbjct 96465 AGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTTGA 96524 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | |||| | || ||||||| | || || |||| || || || || Sbjct 96525 ATCTT-TGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTTT 96583 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | |||||||||||||||||||| Sbjct 96584 CCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 >seq8719 Length=610 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||| || | | || ||||||||||| || ||||| ||||||||||||| | Sbjct 202 CCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGGAC 143 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | ||| |||| || || || || || |||||||| || | |||||||| | ||| Sbjct 142 AAGGT-GCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGG 84 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | ||| || || || || ||| || | || ||| | |||||||||| | ||| | Sbjct 83 GATACCCTCTTTGTCTTGGATTTTC-GCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 25 Query 44289 CCTCCACCGTAATCGTCTTTCC 44310 |||||| ||| || |||||||| Sbjct 24 CCTCCAACGTGATGGTCTTTCC 3 >seq2953 Length=1164165 Score = 95.1 bits (104), Expect = 9e-15 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 ||||| ||||| ||||| | | ||| | || || | ||| || ||||| |||||| Sbjct 120059 TTTTGAATGTTATAATCAGATAAAGTACGCCCATCCTCTAACTGTTTGCCGGCGAAGATC 120000 Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269 | ||||| ||||||| || | || || || || ||||| |||| || | Sbjct 119999 AGTCGCTGTTGATCTGGTGGAATCCCCTCTTTGTCTTGAATCTTAGCTTTCACATTTTCG 119940 Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||||| |||| | ||| ||||| | ||||| ||||| ||||||||||| |||||||| Sbjct 119939 ATGGTATCGGATGCTTCTACCTCGAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAA 119880 Query 44330 ATTTGCATGA 44339 || ||||||| Sbjct 119879 ATCTGCATGA 119870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359951383002981