Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq8214 113 8e-20 seq40411 95.1 2e-14 >seq8214 Length=8124 Score = 113 bits (124), Expect = 8e-20 Identities = 161/218 (74%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGA-TACAAACAAACCACT 135785 |||||||| || |||||| |||| | || || |||| ||||| | | | || ||||| Sbjct 7251 GGTATATGTGACAATTTATTGACATGTACAGTGCGAGCGTGGGACTTCTCA-AAGCCACT 7193 Query 135786 CATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATAT 135845 | ||||||||||||||||| ||| ||||||||||||||||||||| ||||| || Sbjct 7192 TGTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAAT 7133 Query 135846 AGATACGTTAAAATATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaC--TAGC 135902 |||| ||||| || ||| ||||| |||||| | || | || ||||| || Sbjct 7132 AGATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT-TCCTCCA-ATAAGTAAAACTTTAAT 7076 Query 135903 ATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940 |||||||| ||| ||||| |||||||||||||| Sbjct 7075 GTGTGGAGATACAGGCGTTGGTGGTATGGCAGAAGTTG 7038 >seq40411 Length=4262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 188846 CAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAATACGGT 188905 || ||||| ||||| ||| | || || ||||||| || ||||||||| | ||||| Sbjct 917 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCCTCTGATAAACAGGAATATTCA 976 Query 188906 GCACGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATTTCCT 188965 ||| |||| ||||||| || || | ||||||| |||||||| | |||||||||||| Sbjct 977 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 1036 Query 188966 GTTGTTCGTAAACATCCATA 188985 ||| ||||||||| || Sbjct 1037 CCAGTTATTAAACATCCTTA 1056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919703342529080