Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq207734 132 7e-26 seq128380 122 1e-22 seq19754 122 1e-22 seq22291 116 5e-21 seq84804 107 3e-18 seq84803 107 3e-18 >seq207734 Length=1493 Score = 132 bits (146), Expect = 7e-26 Identities = 158/213 (74%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 10481 TAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGT 10540 ||||||| | || || |||||| || || || ||||| || | ||||| | ||||| Sbjct 1123 TAAATTTTTGTAT-TTATAGCTGGTGTCATAGATGAAGACTACCGTGGAAACATTGGAGT 1065 Query 10541 AATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCA 10600 | |||||||||||||| | |||||||||| | | || | ||| |||||||| |||| Sbjct 1064 GGTGTTATTTAATCATTCCAGTGAAGATTTTGCAGTTAAAAAAGGTGATAGAATTGCTCA 1005 Query 10601 ATTAATATGTGAAAAAATTTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAAC 10660 | | |||||||||| |||||| || || | || | |||| || | | |||||||||| Sbjct 1004 ACTGATATGTGAAAGAATTTTCTACCCAGATATAGTTGAAGTTGACAATCTATCAGAAAC 945 Query 10661 AAAAAGATCTGATTTTGGTTTTGGATCTACTGG 10693 ||||||| || ||||||||| ||||| || Sbjct 944 AAAAAGAGGGGAAGGTGGTTTTGGGTCTACAGG 912 >seq128380 Length=670 Score = 122 bits (134), Expect = 1e-22 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | || ||||| ||| ||||||||||| || ||||| ||||| | Sbjct 307 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAATCAG 248 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| |||| || |||||||||||||| | |||||||||||| || | Sbjct 247 ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 188 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| |||||||| || ||||| ||| || | Sbjct 187 GAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 128 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||||| ||||| || || || || ||||| || | ||| ||||||||| Sbjct 127 CTTCTAAAGTGATAGTCTTGCCAGTCAATGTCTTTACGAAAATTTGCATT 78 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||| || |||||||||||||| || ||||| || || || Sbjct 533 CCACCTCTCAGACGAAGTACTAAGTGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 474 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | || |||||||||||||| | ||||| || || |||||| Sbjct 473 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 414 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 413 ATTCCTTCCTTATCTTG 397 >seq19754 Length=5595 Score = 122 bits (134), Expect = 1e-22 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | || ||||| ||| ||||||||||| || ||||| || || | Sbjct 5174 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 5115 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||||||||| || | Sbjct 5114 ATAGCGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 5055 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| || |||||||| || ||||| ||| ||| | Sbjct 5054 GAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATCGTATCAGAAGCTTCCA 4995 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| |||||||| ||||| || || | |||||| | |||||||||||| Sbjct 4994 CTTCCAGTGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 4945 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | || ||| | || |||||||||||||| || || ||||| | Sbjct 4946 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 4887 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| |||| || |||||||||||||| | |||||||||||| || | Sbjct 4886 ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 4827 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| |||||||| || Sbjct 4826 GAATTCCCTCTTTATCCTG 4808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||| ||||||||||||||||| || ||||| || || || Sbjct 5400 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 5341 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | || |||||||||||||| | || || || || |||||| Sbjct 5340 AGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGAGGA 5281 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 5280 ATTCCTTCCTTATCTTG 5264 >seq22291 Length=1216 Score = 116 bits (128), Expect = 5e-21 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | |||||||| || | |||||||||||| ||||| || || | Sbjct 288 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAG 229 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | | || || ||||| |||||||| |||||||| | ||| ||||| |||| Sbjct 228 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 169 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| ||||| || ||||| |||||| ||| ||| | Sbjct 168 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 109 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 |||| | || || |||||||| || | |||||| | || || |||||||| Sbjct 108 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 57 Score = 102 bits (112), Expect = 1e-16 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||||| ||||||| |||||||| ||| || ||||||||||| || | || | || ||| Sbjct 499 AATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATCAGATAATGTACGGCCATC 441 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || | |||||||||||||||||||| || || ||||| || ||||| || ||||| || Sbjct 440 TTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTC 381 Query 146185 TTG 146187 ||| Sbjct 380 TTG 378 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | | | ||| || || |||||||||||||| || || || || || Sbjct 742 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 683 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| |||||||| || || |||||||| | | ||| |||||||||||| Sbjct 682 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 623 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| || || ||| ||| ||| Sbjct 622 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 563 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| || |||||||| || || | |||||||| || |||||||| Sbjct 562 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 516 >seq84804 Length=1020 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||||||||| | || | || | |||||||||||| |||||||| ||||| Sbjct 545 CCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGAC 486 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || | ||| |||||||| ||||||| |||||| ||||| |||||| Sbjct 485 AATGTACGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 426 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 425 ATACCTTCCTTGTCTTG 409 >seq84803 Length=1104 Score = 107 bits (118), Expect = 3e-18 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||||||||| | || | || | ||||||||||| |||||||| ||||| Sbjct 590 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 531 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || | ||| ||||| || ||||||| |||||| ||||| |||||| Sbjct 530 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 471 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| |||||| ||| ||||||| Sbjct 470 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATAGTATCAGAAGCTTCTACT 411 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | || || ||||| || || |||||||| | || |||||||| Sbjct 410 TCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 364 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||| ||||||||||||||||| || || || || ||||| Sbjct 362 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAC 303 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||||||||| ||||| | || || || || || ||| Sbjct 302 AGTGTACGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGA 243 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 242 ATCCCCTCCTTATCTTG 226 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||| || | | || || || |||||||||| |||| || |||||||| ||||| Sbjct 134 CCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCCTTTTGA-ATATTATAGTCTGA 76 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | || | | ||| |||| ||||| ||||| ||||||| || || || || ||||| Sbjct 75 CAATGTGCGCCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGG 16 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| || || Sbjct 15 AATACCTTCCTTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740712831043840